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Detailed information on CNT30610860


BLAST search results

BLAST vs Swiss-Prot:
sp|Q41385|PSAL_SPIOL, E-value = 1e-31

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672902Gossypium raimondiiSetaria viridis18.982087.556forward
CNT30533721Gossypium raimondiiEucalyptus grandis33.914.3383100forward
CNT3021623Gossypium raimondiiCitrullus lanatus23.055.0188.2468forward
CNT30730016Gossypium raimondiiCorchorus capsularis58.6426.1385.55173forward
CNT30629841Gossypium raimondiiVigna unguiculata24.0712.1487.3271forward
CNT30712439Gossypium raimondiiGlycine max23.7311.7185.7170forward
CNT30292923Gossypium raimondiiTriticum aestivum21.3627.6387.363forward
CNT30222283Gossypium raimondiiHordeum vulgare21.361587.363forward
CNT30390478Gossypium raimondiiTriticum turgidum21.365.2987.363forward
CNT30560480Gossypium raimondiiActinidia chinensis209.2289.8359forward
CNT3084834Gossypium raimondiiVigna radiata2015.3288.1459forward
CNT30172489Gossypium raimondiiTrifolium pratense23.055.2886.7668forward
CNT30437582Gossypium raimondiiAegilops tauschii21.3619.0985.7163forward
CNT30261201Gossypium raimondiiBrassica rapa20.686.8786.8961forward
CNT30129085Gossypium raimondiiCorymbia citriodora26.17.3184.4277forward
CNT30683149Gossypium raimondiiTriticum urartu21.3614.2287.363forward
CNT30620323Gossypium raimondiiCajanus cajan29.494.8785.0687forward
CNT30360483Gossypium raimondiiLactuca sativa24.0716.2187.3271forward
CNT30644515Gossypium raimondiiCannabis sativa31.5316.0987.193forward
CNT3027985Gossypium raimondiiTheobroma cacao74.2440.3386.76219forward
CNT3037832Gossypium raimondiiCucumis melo27.129.588.7580forward
CNT30604850Gossypium raimondiiOryza punctata206.0888.1459forward
CNT30112090Gossypium raimondiiFicus carica31.534.5486.0293forward
CNT30726868Gossypium raimondiiLupinus angustifolius23.738.2187.1470forward
CNT3049017Gossypium raimondiiCucumis sativus27.128.1588.7580forward

Expression of CNT30610860

Peptides detected in this lncRNA

>peptide 1 (41 aa)
LPVRVRLGAIDGSPSLNDATPYIVKQMLRITTRPAAAKDPA*

Sequence

>CNT30610860
TCCTCCCAGTCAGGGTTAGGCTCGGTGCTATCGATGGCTCACCTTCTTTGAACGATGCAACGCCATACATCGTCAAGCAAATGCTGAGGATCACAACCAG
ACCAGCAGCGGCTAAGGACCCAGCTTGACCCGCCACCGCAGTGTTCCTTAGAGGGCCGGCCTTAACGAATGGACCAACCAGGAGGAAGCCGTGAGCCAGA
CCCACTTCGATTCCCCTCAGAAGTGGGGGCTTGAGGTGACTGGAGTCTCCAGGCTTCCAATGAAGGGATCGCCGTTGATGGGTTGGATTACTTGA