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Detailed information on CNT30269243


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 8e-53

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30516792Chenopodium quinoaJuglans regia94.0796.2979.81857forward
CNT30616482Chenopodium quinoaSesamum indicum62.4637.3179.96569forward
CNT30195835Chenopodium quinoaPisum sativum27.2297.6483.47248forward
CNT30489027Chenopodium quinoaOlea europaea23.9363.0186.24218forward
CNT30506119Chenopodium quinoaNicotiana attenuata39.7490.7381.22362forward
CNT30559890Chenopodium quinoaActinidia chinensis67.489.979.8614forward
CNT30234460Chenopodium quinoaBrassica oleracea50.0564.8681.14456forward
CNT30508904Chenopodium quinoaSolanum lycopersicum52.9177.9980.91482forward
CNT30341751Chenopodium quinoaEragrostis tef42.9280.7982.86391forward
CNT30573870Chenopodium quinoaVitis vinifera50.9365.8281.03464forward
CNT30121049Chenopodium quinoaCitrus clementina68.0657.380.48620forward
CNT3035160Chenopodium quinoaCucumis melo24.3744.0584.68222forward
CNT30335475Chenopodium quinoaCynara cardunculus50.7135.5781.17462forward

Expression of CNT30269243

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MMEMWDCKMEMWGCMTEMWGCTMEMWGCTTERWGCRLETWGCRLETWGCRLETWGCSLETWGCSLETWGCS*

Sequence

>CNT30269243
GGGGAGGTAGGGCTGTAGGGACTGGATGGTGATATTCTTGGGCTGCTTGGAGAGTATGCAAGTGATGGACTGTATTTGGCTGAAGGGTTATAGCTTGGAG
ATGTAGGACTATAGCTAGGTGAAGTAGGACTATAACTTGGGGATGTAGGGCTATATCCTGGAGATGTAGGGCTGTAAGCAGGAGATGTAGGGCTGTACGA
CGGAGAAGTAGGGCTGTATGATGGAGATGTGGGACTGTAAGATGGAGATGTGGGGCTGTATGACGGAGATGTGGGGCTGTACGATGGAGATGTGGGGCTG
TACGACGGAGAGGTGGGGCTGTAGGCTGGAGACGTGGGGCTGTAGGCTGGAGACGTGGGGCTGTAGGCTGGAGACGTGGGGCTGTAGCTTGGAGACGTGG
GGCTGTAGCTTGGAGACGTGGGGCTGTAGCTAGGAGATGTGGGGCTGTAGCTTGGAGATGTGGGGCTGTAAGATGGGCTGGTGGGTGAATATGCTGGGCT
TGTAGGACTATAGCCAGGAGACCCAGGACTGTAAGTCGGGGAAGTAGGGCTATATCCAGGAGAGGTTGGACTATATCCTGGAGAAGTTGGGCTATATCCA
GGAGAAGTTGGGCTATATCCAGGCGAATTTGGTGAGAGATAAGCAGGAGATGAAGCAGGAGAGAAGGCCATGCCACCAACAAATGGAGAAAATGAAGCAT
CATTAATGGGCGAATGTCGGATATTTGGGCTGAGCAAGTAGCTAGGAGACATCATACTCTCATGGTAAGGTGTTCCGGAAATGGGTGACCGAGCAGGTGT
CATCCCAAATTCCAAGCCTTCCACATAACTTGGAAGATGGACTTCAATAGCATGCTGCAACATTTCCTCATTAAGATATAATGAACAGCCACCAGTTCCA
ATTGGTGCTAG