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Detailed information on CNT30573870


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 4e-85

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640872Vitis viniferaNymphaea colorata84.6878.8680.4597forward
CNT30315993Vitis viniferaCorylus avellana69.6548.9581.06491forward
CNT30377104Vitis viniferaArabidopsis thaliana89.0888.9580.25628forward
CNT30500730Vitis viniferaCoffea canephora54.3344.3383.03383forward
CNT30616482Vitis viniferaSesamum indicum87.2340.3381.63615forward
CNT30269243Vitis viniferaChenopodium quinoa65.8250.9381.03464forward
CNT30727661Vitis viniferaCorchorus capsularis79.4389.4681.25560forward
CNT30628702Vitis viniferaVigna unguiculata65.8267.7481.25464forward
CNT30710559Vitis viniferaGlycine max67.0971.6781.18473forward
CNT3042435Vitis viniferaPrunus dulcis94.6196.3981.71667forward
CNT3091337Vitis viniferaSolanum tuberosum87.9475.9880.16620forward
CNT30559890Vitis viniferaActinidia chinensis79.5782.1483.96561forward
CNT30591949Vitis viniferaMusa acuminata61.5689.381.11434forward
CNT3087851Vitis viniferaVigna radiata55.1842.5681.49389forward
CNT30554721Vitis viniferaOryza glaberrima55.1841.679.95389forward
CNT30256659Vitis viniferaAvena sativa43.9743.3680.32310forward
CNT3076593Vitis viniferaBrassica juncea69.2289.3879.92488forward
CNT30263459Vitis viniferaBrassica rapa64.2683.7379.91453forward
CNT30607743Vitis viniferaGossypium raimondii93.998.0781.27662forward
CNT30648676Vitis viniferaRosa chinensis94.7589.6679.79668forward
CNT30596736Vitis viniferaOryza meridionalis51.3547.9579.83362forward
CNT30370935Vitis viniferaOryza glumipatula43.431.6182.03306forward
CNT30154742Vitis viniferaPrunus persica96.3180.9382.18679forward
CNT30705862Vitis viniferaPrunus avium66.9544.4483.26472forward
CNT30642027Vitis viniferaCannabis sativa61.9968.580.78437forward
CNT3028162Vitis viniferaTheobroma cacao66.9584.1480.72472forward
CNT3051702Vitis viniferaAmborella trichopoda76.4588.0779.78539forward
CNT30121168Vitis viniferaCitrus clementina73.4848.7882.24518forward
CNT3035176Vitis viniferaCucumis melo68.0987.2781.88480forward
CNT30330871Vitis viniferaDioscorea rotundata39.8638.8783.99281forward
CNT30150463Vitis viniferaBrachypodium distachyon64.1151.4278.76452forward
CNT30103173Vitis viniferaOryza rufipogon38.5828.0182.35272forward
CNT30584450Vitis viniferaEchinochloa crusgalli64.1160.3580.31452forward
CNT30497833Vitis viniferaDigitaria exilis50.9240.780.22359forward
CNT30176441Vitis viniferaVigna angularis60.7170.7481.78428forward
CNT30558075Vitis viniferaPanicum hallii45.8240.9481.73323forward
CNT3049385Vitis viniferaCucumis sativus65.8258.5981.25464forward

Expression of CNT30573870

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MSDCKGLMEIVLDCWENMPVMGCILLRKDYN*

>peptide 2 (78 aa)
MLDCNQERSGYMPERWGCMMERLDYKKVRLGYRMVRLGYRKVRWGCKQEKWGCMQEKWGCMRVMLGCRQEKLDCNLEK*

>peptide 3 (33 aa)
MWGCSWGMLGSKMDLWENMQDLLDYIQESWDCM*

Sequence

>CNT30573870
ATGTCGGACTGTAAGGGCTTGATGGAGATAGTCTTGGACTGCTGGGAGAATATGCCAGTGATGGGCTGTATTTTGCTGAGGAAGGATTATAACTAGGTGA
TGTAGGGCTGTAGCTTGGAGAGGTGGGACTGTAGCTAGGAGATGTTGGACTGTAACCAGGAGAGGTCGGGCTATATGCCGGAGAGGTGGGGCTGTATGAT
GGAGAGGTTGGACTATAAGAAGGTGAGGTTGGGCTATAGGATGGTGAGGTTGGGCTATAGGAAGGTGAGGTGGGGCTGTAAGCAGGAGAAGTGGGGCTGT
ATGCAGGAGAAGTGGGGCTGTATGAGGGTGATGTTGGGCTGTAGACAGGAGAAGTTGGACTGTAACTTGGAGAAGTAGGACTGTAGCTTGGAGATGTAGG
ACTGTAACTGGGAGATGTGGGGCTGTAGCTGGGGGATGTTGGGGAGTAAGATGGACTTGTGGGAGAATATGCAGGACTTGTTGGACTATATCCAGGAGAG
CTGGGACTGTATGTAGGTGAGGTAGGGCTGTAACCAGGTGAAGTGGGGCTGTATCCTGGGGAGGTTGGACTGTAGCCAGGAGAAGTAGGGCTATAACCAG
GAGATGATGGACTATATCCTGGAGAAGATGGACTGTAACCTGGTGACGATGTAGGAGAGAATGCCATGCCCCCAACATAAGGAGAAAATTGTGCATCTGT
AATTG