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Detailed information on CNT30195835


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523577Pisum sativumSetaria italica69.2928.4380.68176forward
CNT30316024Pisum sativumCorylus avellana85.8327.0885.32218forward
CNT30516792Pisum sativumJuglans regia10028.5482.28254forward
CNT30376525Pisum sativumArabidopsis thaliana97.6432.4281.45248forward
CNT30500604Pisum sativumCoffea canephora97.6440.3380.65248forward
CNT30269243Pisum sativumChenopodium quinoa97.6427.2283.47248forward
CNT3021339Pisum sativumCitrullus lanatus85.8334.3881.19218forward
CNT30379142Pisum sativumManihot esculenta70.8719.2780.56180forward
CNT30524942Pisum sativumPhaseolus vulgaris83.4631.5988.21212forward
CNT30628702Pisum sativumVigna unguiculata74.0227.4586.7188forward
CNT30490956Pisum sativumOlea europaea61.0236.983.87155forward
CNT30506119Pisum sativumNicotiana attenuata98.8262.9183.27251forward
CNT30710529Pisum sativumGlycine max76.3834.490.21194forward
CNT3042412Pisum sativumPrunus dulcis10034.2883.07254forward
CNT3091192Pisum sativumSolanum tuberosum83.4630.5982.55212forward
CNT30559890Pisum sativumActinidia chinensis94.0934.9984.1239forward
CNT3087851Pisum sativumVigna radiata74.0220.5790.43188forward
CNT30508904Pisum sativumSolanum lycopersicum88.1936.2581.7224forward
CNT30554580Pisum sativumOryza glaberrima78.7429.4182200forward
CNT30171519Pisum sativumTrifolium pratense35.0426.1894.3889forward
CNT30145737Pisum sativumMedicago truncatula56.323.2190.91143forward
CNT30256659Pisum sativumAvena sativa55.1219.5885140forward
CNT30668234Pisum sativumTriticum dicoccoides40.9417.6984.62104forward
CNT30311656Pisum sativumCamelina sativa85.0438.9283.33216forward
CNT3062262Pisum sativumArabidopsis lyrata97.6445.2681.05248forward
CNT30263540Pisum sativumBrassica rapa69.2927.2981.82176forward
CNT3017147Pisum sativumZea mays68.1124.283.82173forward
CNT30607691Pisum sativumGossypium raimondii62.223.3484.18158forward
CNT30620207Pisum sativumCajanus cajan77.569.1784.26197forward
CNT30370935Pisum sativumOryza glumipatula84.6522.2181.4215forward
CNT30154791Pisum sativumPrunus persica10032.6983.07254forward
CNT30408809Pisum sativumPapaver somniferum85.8325.2381.19218forward
CNT30574226Pisum sativumVitis vinifera98.8250.384.46251forward
CNT30705859Pisum sativumPrunus avium1003481.1254forward
CNT30642028Pisum sativumCannabis sativa92.9146.0980.51236forward
CNT3028162Pisum sativumTheobroma cacao69.2931.3783.52176forward
CNT30121063Pisum sativumCitrus clementina69.2936.7482.95176forward
CNT3035176Pisum sativumCucumis melo63.3929.2783.85161forward
CNT30150023Pisum sativumBrachypodium distachyon75.225.4781.68191forward
CNT30103167Pisum sativumOryza rufipogon84.6524.8381.4215forward
CNT30577348Pisum sativumOryza barthii54.3353.784.78138forward
CNT30584443Pisum sativumEchinochloa crusgalli57.4821.0782.19146forward
CNT30176441Pisum sativumVigna angularis97.6440.9984.27248forward

Expression of CNT30195835

Peptides detected in this lncRNA

>peptide 1 (41 aa)
GCKRVMWGCTQERWDCKQVKWGCMLVKLGCMQVKWDCSWEM*

Sequence

>CNT30195835
GGGCTGTAAGAGGGTGATGTGGGGCTGTACCCAGGAGAGGTGGGACTGTAAGCAGGTGAAGTGGGGCTGTATGCTGGTGAAGTTGGGCTGTATGCAGGTG
AAGTGGGACTGTAGCTGGGAGATGTAGGGCTGTAACTGGGAGATGTGGGGCTATAGCTGGGCGATGTGGGACTGTAGCTGGGTGATGTGGGAGAGTAAGA
TGGACTTGTAGGTGAATAAGCTGGGCTCGTAGGACTATATCCAGGAGAGCTAGG