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Detailed information on CNT30226086


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002272, E-value = 1e-98

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690830Hordeum vulgareOryza sativa6.9810096.77371reverse complement
CNT30501326Hordeum vulgareCoffea canephora37.9719.0889.092017forward
CNT30201076Hordeum vulgarePisum sativum7.1259.989.68378reverse complement
CNT30486612Hordeum vulgareOlea europaea4.4292.5290.21235reverse complement
CNT3043372Hordeum vulgarePrunus dulcis5.2547.2189.61279forward
CNT30398268Hordeum vulgareTriticum turgidum20.16100.0998.791071forward
CNT30592635Hordeum vulgareMusa acuminata4.3525.1985.71231forward
CNT3087111Hordeum vulgareVigna radiata6.9397.193.21368forward
CNT30544951Hordeum vulgareBrassica napus11.84100.3294.28629forward
CNT30239040Hordeum vulgareBrassica oleracea9.8899.2494.48525forward
CNT30252713Hordeum vulgareAvena sativa5.8739.5995.83312reverse complement
CNT30688804Hordeum vulgareTriticum urartu44.3763.6398.772357forward
CNT30365219Hordeum vulgareSorghum bicolor8.1953.4495.17435reverse complement
CNT30596381Hordeum vulgareOryza meridionalis3.2959.5297.71175forward
CNT30482060Hordeum vulgareChara braunii1.7325.6391.392forward
CNT30104511Hordeum vulgareOryza rufipogon6.17100.3197.26328reverse complement

Expression of CNT30226086

Peptides detected in this lncRNA

>peptide 1 (90 aa)
MVAPPVLSFSRSHQGGPLWGNKEMDKKRGLLLRAMPPITYEGSRIRPIASTYNVMITLVYPFLVVQRMVAPPTRKGRNMETSLPFRSENL*

>peptide 2 (89 aa)
MTGSDRIGLCAPAPSGVHILADLSVYTMLCGRNILIPSTAVTPEIQGSTRAPVLRRGGRTARGLAPGVGRVKSAGVMQIHMPLPFCRVV*

>peptide 3 (50 aa)
MRATPPTGWTTPQAKVLPRQEKGDRNKKRELVVGGKTRLVPCDSTEEYAR*

>peptide 4 (49 aa)
SELSGQPLTLGVFRFCQIYRDITSPPSQIPSPRPSGSPVLPKSLMLTLL*

>peptide 5 (49 aa)
MVATVVLYIVGGSYCFYDSSASSSCFYFACLREGLESFSLGPNSSKRKI*

>peptide 6 (48 aa)
MFFRAIDHVEKDQPTTQIKTVPFGYLEREVLFMMLRTAVRSACNDGLG*

>peptide 7 (48 aa)
MNHSSGLSLPPHPKTDPRHSAHSFRAREGNEVQFERPQRSGAAATRSS*

>peptide 8 (48 aa)
MASGGFGIAAHVRLRFAFPLDWTRVSCRKYGYESDLGSPVQAQLLALR*

>peptide 9 (48 aa)
MPGNVSRRRTTTRKLTTFAFSLHEMSQCIGPMDNRTELAKRLGALHTM*

>peptide 10 (41 aa)
MLVFSALTLESFASRVVANNAACVAGDARPSFRPASCPKEG*

>peptide 11 (36 aa)
MVGIGGGCLTFGVVVRAPVPNRRMSDPFPCGSWPYH*

>peptide 12 (37 aa)
MSRSFNCPSETRSRSAMHGRPPCPFFLSVPPGWAPLG*

>peptide 13 (96 aa)
MMRGRDEVTYYDHALKFCPSARHMEPLSCSLGIGRPTPPFPRGGRAVFPLQPPSGGRKRKRVGSVRFAFYCKERAFHSLIEARAHAGKAQRSCREH*

Sequence

>CNT30226086
GAGTGAGCTCAGTGGTCAGCCCCTGACGTTAGGGGTCTTTCGCTTTTGCCAGATCTATAGAGATATTACGAGTCCTCCGTCCCAGATTCCCTCGCCGCGG
CCATCTGGTTCACCGGTACTACCAAAAAGTCTCATGCTTACGTTACTGTGACTGATATATAAGTATGATCTCGGACTACGAAGACCCAGTTGTGCTTCTG
GTTTCCATTCTCATCATCATATTGAAGGAAACTCCTCGTGCTCTGCCATAAGAACTTGGAGTCCGTATCATGGTGAAGGTAAGGTAACGCTGTGATTCTT
GCTCAAAAAACTGACCGAACACGTTCGAGTTATTGGCTCGTCCGACCCGGCAGCATTCATGAGTCGCTCGTTCAACTGTCCCTCGGAGACACGGTCGAGA
AGTGCCATGCATGGTCGCCCCCCCTGTCCTTTCTTTCTCTCGGTCCCACCAGGGTGGGCCCCTCTGGGGTAATAAAGAAATGGATAAAAAAAGGGGACTT
CTGCTACGGGCTATGCCACCCATTACTTATGAGGGAAGTCGCATCCGTCCCATCGCAAGCACCTACAATGTCATGATCACATTGGTTTATCCTTTTTTGG
TAGTTCAACGGATGGTCGCCCCTCCAACAAGAAAAGGTAGAAATATGGAAACTTCTCTGCCATTTAGATCGGAGAATTTATAGAGGAAATCGGGTTTTAA
ATTTCCAGAAACCACACGATTATATAGCCAAAGGGAATACGCCGCGCCTAAAATCATCCCAAGCGCAGCTAATGTGGCTACTAAGCTATTTCTTTGGAAA
GCTCCTACTAAGATTAGAAATTCCCCGATAAAGCTGCTAGTGCCGGGTAAACTCATATTGGCTAAAGTGAAAAAGAAGAAAATGGTAGAGAAATTCGGCA
TGGTGCTCACTAAACCTCCATAATATCTAACAAGTCGAGTCTTATGTCGGTCATATAGAACACCAACACATAGAAAAAGGGCTGAAGAAACCAGTCCATG
ACTTAACATAAGTAAAATGCTACCTCCAATTCCCTGTATGTTCGATAGAGCCTAATATTCCCCCAGAGTACGCTGCTTACCCCCCGAACCGTACAAGATA
GTTACCACCTATCATACGGCTTTCTAACTCCACTTCTTTTTCTGGTCGTTCCGCTCTGTCGGATCGATGGTAGTCTCAGAGATCTGGTAACCTCCGACAT
TTTTGACAACACGCTTCCTGCTTCCGTTTTGAGTTGCGCATCTTTCTCCCCGGGGCATACTATACAATAGTATCACATCGTAGACCCCCACCCCAACTCT
ATCTTCCTTATCAGTGAACCGGAACATAGTGCATAGGTGCTCTTCGATGATGCGAGGACGAGACGAGGTGACATACTACGATCACGCACTGAAGTTCTGC
CCTTCGGCTCGGCATATGGAACCTCTCAGCTGCTCCCTCGGGATAGGTAGGCCCACCCCCCCTTTCCCGAGAGGCGGCCGGGCTGTGTTTCCCCTGCAGC
CACCCAGTGGCGGCAGAAAACGAAAAAGGGTGGGCTCCGTGCGGTTCGCGTTTTATTGTAAAGAGAGAGCTTTTCATTCTCTTATAGAAGCCCGCGCCCA
CGCGGGTAAAGCCCAGCGAAGCTGCAGGGAGCACTGAGCAATGGGGGGATGAGGGCGACTCCGCCCACGGGTTGGACCACACCACAGGCAAAAGTCCTTC
CACGGCAAGAGAAGGGTGACCGGAACAAGAAAAGGGAGCTAGTCGTTGGAGGGAAGACAAGGCTCGTTCCGTGCGACTCCACAGAAGAGTACGCGCGCTA
GAAAAGGCAGCCAGCTTAAAAACGCTAGCTAGCTACTTTTCTAGCCTTTTTTAGTTTGGTTGCCTACGCTTGCTCTCCGGCGCGCTACGACAACACCCCC
TGCTTGCTTCTTTCTGTTCGACGCGGAGCTCGCCGCCTCCCCACCCTTGCTTAGCGTTCCACTTGTGATCCTGGAGGATTTGGAGAAATGCGCCCGACCA
TGAAGAATGGATTTTTTATTTTCTTTCATGTGAACGGCCCTATCTTGTAAAGAATGTTTTTTCGTGCTATAGACCACGTTGAGAAAGACCAACCAACAAC
ACAAATAAAGACCGTTCCATTTGGGTACCTCGAAAGGGAGGTGCTCTTTATGATGCTACGGACGGCTGTCCGAAGTGCATGCAATGACGGGCTCGGATAG
GATAGGATTGTGCGCGCCGGCCCCTTCGGGTGTCCATATTTTGGCCGACCTTAGCGTATATACTATGTTATGCGGCCGTAATATTTTGATACCTTCCACC
GCTGTTACGCCAGAAATCCAAGGTTCCACACGAGCTCCTGTTCTGCGGCGTGGTGGCAGGACCGCTAGGGGATTGGCTCCGGGTGTAGGTAGGGTCAAAT
CCGCAGGGGTCATGCAAATACATATGCCCCTTCCCTTCTGCCGAGTTGTTTAGAAGGCGCTTTCCGTTCTACGGTCCCTCGGAGCGAAGGGTTAGGCAGG
TAGTACGGGCCCTCTGACTTCCAGCTATGTGTTGTGTGCGACTCCCGCGAAGCGAATGAAGGGAAGCTCTTCGAGCTTTCTCCGCCAGCGGCTTATGTAG
TGGTCGGCATTCCTACGTGCTCCGACTGATCCCCACTGGAGATTATATGAGGGGTCTTGGAAACTGTCGTGACGCTTTGGTGACGAAGGTCACCGGGGTG
ACTATGGAAGGATTCCGTGGTAGTCTCTGACTCCCTCCAACTCAATCAATATCAAGAACATGTCGTGAGCATGGGGGTTTGGCCGACTACTAAACTAGAC
TATTGGCTAGGGCTTTTCTAGTTATAGCTTCTATAGTGAGTGGCCCTTCCGCTTTGATCTAGTTGTAGTTTGTATTGTACTAAATTGAACACATATCAAA
GAAAGGCGATCAATCAATAAGTAGTTGCCCTTCTCCGGCCTGGGAAAAGCAGCGAACTCGTTAAACTAGGGGCTTTTTTATTCATGGTCGCTACTGTTGT
ATTGTATATTGTCGGGGGAAGCTACTGCTTTTACGACAGCTCCGCTTCCTCGTCTTGCTTCTACTTTGCTTGTTTGCGCGAAGGCTTAGAGTCCTTTTCG
CTAGGTCCAAATTCGTCAAAGCGAAAGATCTGATCCAACGGAAATCCCGCATATTGAGCGCAGCTGATATGTGGCTACTAGGCGCGATCATCCCGCATGC
CATAAAATAAATACTTCTTTTTTTATGGCCCGTCATATAAAGATAGAATAGATATGGATAGAGAGACATTCTATTGATTCGCAAAATGGCTCGTCGATCC
AAATGAATCATTCTTCTGGTCTCTCTCTGCCCCCCCACCCCAAAACTGACCCACGACACAGCGCCCATTCGTTTCGCGCGCGGGAAGGCAACGAAGTTCA
GTTCGAAAGACCGCAGCGGAGTGGAGCAGCCGCGACACGAAGTTCCTAACCTTAGCTGGATCTCGCTGGTGCCACCTAAATGGTAGGTATAGGCGGCGGA
TGTCTGACGTTTGGAGTTGTCGTTCGTGCACCTGTCCCCAATAGAAGAATGAGTGATCCCTTCCCCTGCGGATCATGGCCTTACCACTAGGTCCCCGATG
GCCAGCGGGGGATTCGGTATAGCAGCTCACGTTCGTTTGCGCTTCGCGTTCCCGCTGGACTGGACACGTGTTAGCTGTAGGAAGTATGGTTACGAAAGTG
ACTTAGGTTCGCCAGTTCAGGCTCAACTCCTCGCTTTACGTTAGCGGACTTACAGGTCGGGCCGGGGCTCCACGCTCTTTCTTTCTGTGTGGGACGATGC
CGGGGAATGTGTCGAGGCGGCGAACAACAACAAGAAAACTAACTACATTTGCTTTTTCCCTCCATGAGATGAGCCAGTGCATTGGACCGATGGATAATAG
AACTGAGCTGGCCAAACGCTTGGGCGCTCTACATACGATGTAGAAAAAATCAGATACATATCGATTTCTTTCTGATGGATCCAGAATAGATAGATATCTT
GTATCATCAATAGATAGAAAGAGGTCAACCCTTATTATTGATAGAAAACCTTTCGATCTATCAGAACAGATCAGGCCATCTATCAATCGATTTGAATCAT
CTCGCTTTTCGTTCATTTCAGCCACGCCATAATAGCCGCCACAATAAGAAAGAAGCAAGCGAAACAGCTAGAAGCGCTCGCTTCGCCGTGCCCAACAATT
CTTATTCACGGGAAAGCCAACCGAAAGATTCGATTCAGACTTCGTAGAGCCGGTGCTGCTGCTGTCTGCGTAGGGCCGTCCCCCACTCCCGTCCCGGGGC
GCTAAGGGGTTTTGTTTTAGGAACAGACGGCGGTGTTTTGCTGACGCCTCGAATCGACGCTTTTGTTGCGACATGCTAAGTTTTCTCCCCTATTGCTAGT
AGGTTGATGGGTCGCACGCCCGGCACACATGTTTTGGCCTTGCTTGTGTGTCCATAACTCAAAATAGGTGACCTAACGGCTGCCGTCCGACTAAACATAC
CAATAGTCACCAAATTCATATGGGCTACTGAGGAGTAGGCAATGATCTTCTTAAGATCGATCTGTCTTAAAGTGGTCAAGGAAGTATATATTATAGCAAT
CGCGCTTAGAGTATAAATGAAAGGAGTGAAACAAAGTGTCGCTTCGGGAAACATGGGTATTGAAAATCTTAAAAACCCGTAGGTTCCCAATTTTCAAAGA
ATTCCAGCCAAGATGACGGATCCAGCCGTAGGTGCCTCTACATGGGCTTCGGGTAACCAAATATGAACTGGTACCATAGGCACTTTGACGACAAAAGAGG
CGAAAAAAGCAATCCATAGAAGGATTTGGCGCCACTCACTAAATTCAGTGGTTAATAAAATTTGTAAATCGGTGGTTCCTGTTTGGAGAAGAATCAACAG
AATAGCTAATAGCATAAAAACGGATCCAAGTAAAGTATATAGGAAAAACTGATATGCTGCCTTGATCTTTCTTTGTCTCGAACCCCATACCCCTATAATG
ATGGTAGAGTCAGGGGTGGCCCTAAAGCGGAATTGACCGGTGGTAGTTGGTCGAAGCTCCAGTGGGTAGCCACTCCCTTCTCAGGGAACCGTACGTGAGA
CTTCCACATCATACGGCTCCGTCCCGAGCTTCCGTCGTCGGCCCTTGTCATTAGACCACTATGCTTGTCTTTTCCGCCTTGACTCTCGAATCTTTTGCTT
CTCGGGTGGTGGCGAACAATGCTGCTTGCGTAGCGGGAGATGCCCGCCCGTCGTTTAGGCCTGCTTCCTGCCCGAAAGAAGGCTAGCCGGACTAGTGGTA
GGGGACCCGACC