Detailed information on CNT30201076


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002441, E-value = 2e-80

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30537189Pisum sativumEucalyptus grandis4284.9490.94265reverse complement
CNT3043372Pisum sativumPrunus dulcis68.4673.188.43432reverse complement
CNT30226086Pisum sativumHordeum vulgare67.678.0488.99427reverse complement
CNT30684394Pisum sativumTriticum urartu42.1627.2592.48266reverse complement
CNT30104511Pisum sativumOryza rufipogon16.832.4290.57106forward

Expression of CNT30201076

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MHVLDRVSEGQLNERLMNAAGLDEPITRTRSVCFLSKNHSVTLPSP*

>peptide 2 (47 aa)
TTKEKRVNQCDHDIVGACDGADATSLSWFGWYSPLQKSPLFLIHFCL*

Sequence

>CNT30201076
ACTACCAAAGAAAAAAGGGTAAACCAATGTGATCATGACATTGTAGGTGCTTGCGATGGGGCGGATGCGACTTCCCTCAGTTGGTTTGGGTGGTATAGCC
CGTTGCAGAAGTCCCCCCTTTTTTTGATCCATTTCTGTCTTTAGTCTTTAGGGTGACTTTACTAAAAAAATAAGGCTCGCGCAGGGGCCGTTTTTTGGCT
GAGCCGTATCTTGCTGGGTGGGACCGAGAGCAAGAAAGGACGGGGGGCAACCATGCATGTTCTCGACCGTGTCTCCGAGGGACAGTTGAACGAGCGACTC
ATGAATGCTGCCGGGTTGGACGAGCCAATAACTCGAACGCGTTCGGTCTGTTTTTTGAGCAAGAATCACAGCGTTACCTTACCTTCACCATGATACGGAC
TCCAAGTTCTTATGGCAGAGCGCGAGGAGATTGATCATATCAATATGATGATGGGAATGGAAACCAGAAGCACGACCGACCGGGGTCCAAGATAATCAAA
CCATCAGTAACAGTAGTAACGTAAGCATGAGACTTTTTGGTAGTACCGGTGAACCAGATGGCCGCGGCGATGGAATCTGGGACGGAGGACTCGTAGTATC
TCTCTAGATCTGGCAAAAGCTAAAGACCCCT