Detailed information on CNT30690830


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT005611, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30501326Oryza sativaCoffea canephora97.573.4288.4362reverse complement
CNT30486612Oryza sativaOlea europaea15.923.2396.6159forward
CNT30226086Oryza sativaHordeum vulgare1006.9896.77371reverse complement
CNT30398268Oryza sativaTriticum turgidum10034.6797.04371reverse complement
CNT30688804Oryza sativaTriticum urartu10010.0297.3371reverse complement

Expression of CNT30690830

Peptides detected in this lncRNA

>peptide 1 (67 aa)
IIRVDLFLSIDDTRYLSILDPSERNRYVSDGVYIVCRAPKRFFGQLSSIIHRSNALAHLMGGKSKCS*

>peptide 2 (91 aa)
MIQDIYLFWIHQKEIDMYLMESTSYVERPSAFLASSVLLSIGPMHWRISWGEKANVVSCLVVVRRLDTFPGIVPHRKKERGAPARPVSPLT*

Sequence

>CNT30690830
CAATAATAAGGGTTGACCTCTTTCTATCTATTGATGATACAAGATATCTATCTATTCTGGATCCATCAGAAAGAAATCGATATGTATCTGATGGAGTCTA
CATCGTATGTAGAGCGCCCAAGCGCTTTTTTGGCCAGCTCAGTTCTATTATCCATCGGTCCAATGCACTGGCGCATCTCATGGGGGGAAAAAGCAAATGT
AGTTAGTTGTCTTGTTGTTGTTCGCCGCCTCGACACATTCCCCGGCATCGTCCCACACAGAAAGAAAGAGCGTGGAGCCCCGGCCCGACCTGTAAGTCCG
CTAACGTAAAGCGAGGAGTTGAGCCTGAACTGGCGAACCGAAGTCACTTTCGTAACCATACTTCCTACAGC