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Detailed information on CNT30688804


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690830Triticum urartuOryza sativa10.0210097.3371reverse complement
CNT30374334Triticum urartuArabidopsis thaliana21.6511.789.03802forward
CNT30501326Triticum urartuCoffea canephora54.4519.0889.392017forward
CNT30486612Triticum urartuOlea europaea6.91100.7989.84256reverse complement
CNT30307873Triticum urartuTriticum aestivum11.39100.2499.05422reverse complement
CNT30226086Triticum urartuHordeum vulgare63.6344.3798.732357forward
CNT30398268Triticum urartuTriticum turgidum28.8910099.811070forward
CNT30544951Triticum urartuBrassica napus16.98100.3294.91629forward
CNT30239040Triticum urartuBrassica oleracea14.1799.2495.24525forward
CNT30713027Triticum urartuMalus domestica golden21.7122.7889.8804forward
CNT30365219Triticum urartuSorghum bicolor11.7453.4495.63435reverse complement
CNT30596381Triticum urartuOryza meridionalis4.7259.5297.71175forward
CNT30328854Triticum urartuAsparagus officinalis19.8286.8687.47734forward
CNT3036187Triticum urartuCucumis melo5.5622.7993.2206reverse complement
CNT30102192Triticum urartuOryza rufipogon36.5859.1795.061355forward

Expression of CNT30688804

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MDVFIRKPSKAFHKLRFGRRRIELYPRNRGIQKSNKRNAQTNQSYRSY*

>peptide 2 (44 aa)
NSLNKGLFYSWSLLLYCILSGEATASTTAPLPRLASTLLVCAKA*

>peptide 3 (50 aa)
MNHSSGLSLPPRPKTDPRHSAHSFRAREGNEVQFKRPQRSGAAATRSSLP*

>peptide 4 (48 aa)
MASGGFGIAAHVRLRFAFPLDWTRVSCRKYGYESDFGSPVQAQLLALR*

>peptide 5 (58 aa)
LVKQGAFLFMVATVVLYIVGGSYCFYDSSASSSCFYFACLREGLESFSLGPNSSKRKI*

>peptide 6 (85 aa)
MVTKVTSVRQFRLNSSLYVSGLTGRAGAPRSFFLCGTMPGNVSRRRTTTRQLTTFAFSLHEMSQCIGPMDNRTELAKRLGALHTM*

>peptide 7 (79 aa)
MPARRLGLLPARKKASRTSGRGPERQKPYPILEPSAELYPARIYLEGGQRNVSTCCQQSFFGILLNGSILPSVCFSNLS*

>peptide 8 (29 aa)
MLTHKTTPLPESFTGTFTTLRRQGTAHRG*

>peptide 9 (36 aa)
MWSISRRIMKDRLYPYTNGCFHKEAIEGFPQIEIWP*

>peptide 10 (41 aa)
MLVFSALTLESFASWVVANNAACVAGDARPSFRPTSCPKEG*

>peptide 11 (43 aa)
MCGSVVRPEMLCLRTRLPLFPKASRGPLLLYDDRGLPIGGDRP*

>peptide 12 (59 aa)
MQDTAIIRNSRIRNAVIYSFPKLLIPHQPTEMQIGIRNVVNITKNNERPSIPIYKWMFS*

Sequence

>CNT30688804
AACTCGTTAAACAAGGGGCTTTTTTATTCATGGTCGCTACTGTTGTATTGTATATTGTCGGGGGAAGCTACTGCTTCTACGACAGCTCCGCTTCCTCGTC
TTGCTTCTACTTTGCTTGTTTGCGCGAAGGCTTAGAGTCCTTTTCGCTAGGTCCAAATTCGTCAAAGCGAAAGATCTGATCCAACGGAAATCCCGCATAT
TGAGCGCAGCTGATATGTGGCTACTAGGCGCGATCATCCCGCATGCCATAAAAAAATACTTCTTTTTTTTATGGCCCGTCATATAAAGATAGAATAGATA
TGGATAGAGAGACATTCTATTGATTCGCGAAATGGCTCGTCGATCCAAATGAATCATTCTTCTGGTCTCTCTCTGCCCCCCCGCCCCAAAACTGACCCAC
GACACAGCGCCCATTCGTTTCGCGCGCGGGAAGGCAACGAAGTTCAGTTCAAAAGACCGCAGCGGAGTGGAGCAGCCGCGACACGAAGTTCCTTACCTTA
GCTGGATCTCGCTGGTGCCACCTAAACGGTAGGTATAGGCGGCGGATGTCTGACGTTTGGAGTTGTCGTTCGTGCACCTGTCCCCAATAGAAGAATGAGT
GATCCCTTCCCCTGCGGATCATGGCCTTACCACTAGGTCCCCGATGGCCAGCGGGGGATTCGGTATAGCAGCTCACGTTCGTTTGCGCTTCGCGTTCCCG
CTGGACTGGACACGTGTTAGCTGTAGGAAGTATGGTTACGAAAGTGACTTCGGTTCGCCAGTTCAGGCTCAACTCCTCGCTTTACGTTAGCGGACTTACA
GGTCGGGCCGGGGCTCCACGCTCTTTCTTTCTGTGTGGGACGATGCCGGGGAATGTGTCGAGGCGGCGAACAACAACAAGACAACTAACTACATTTGCTT
TTTCCCTCCATGAGATGAGCCAGTGCATTGGACCGATGGATAATAGAACTGAGCTGGCCAAACGCTTGGGCGCTCTACATACGATGTAGAAAAAATCAGA
TACATATCGATTTCTTTCTGATGGATCCAGAATAGATAGATATCTTGTATCATCAATAGATAGAAAGAGGTCAACCCTTATTATTGATAGAAAACCTTTC
GATCTATCAGAACAGATCAGGCCATCTATCAATCGATTTGAATCATCTCGCTTTTCGTTCATTTCAGCCACGCCATAATAGCCGCCACAATAAGAAAGAA
GCAAGCGAAACAGCTAGAAGCGCTCGCTTCGCCGCGCCCAACAATTCTTATTCACGGGAAAGCCAACCGAAAGATTCGATTCGGACTTCGTAGAGCCGGT
GCTGCTGCTGTCTGCGTAGGGCCGTCCCCCACTCCCGTCCCGGGGCGCTAAGGGGTTTTGTTTTAGGAACAGACGGCGGTGTTTTGCTGACGCCTCGAAT
CGACGCTTTTGTTGCGACATGCTAAGTTTTCTCCCCTATTGCTAGTAGGTTGATGGGTCGCACGCCCGGCACACATGTTTTGGCCTTGCTTGTGTGTCCA
TAACTCAAAATAGGTGACCTAACGGCCGCCGCCCGACTAAACATACCAATAGTCACCAAATTCATATGGGCTACTGAGGAGTAGGCAATGATCTTCTTAA
GATCGATCTGTCTTAAAGTGGTCAAGGAAGTATATATTATAGCAATCGCGCTTAGAGTATAAATGAAAGGAGTGAAACAAAGTGTCGCTTCGGGAAACAT
GGGTATTGAAAATCTTAAAAACCCGTAGGTTCCCAATTTTAAAAGAATTCCAGCCAAGATGACGGATCCAGCCGTAGGTGCCTCTACATGGGCTTCGGGT
AACCAAATATGAACTGGTACCATAGGCACTTTGACGGCAAAAGAGGCGAAAAAAGCAATCCATAGAAGGATTTGGCGCCGCTCACTAAATTCAGTGGTTA
ATAAAATTTGTAAATCGGTGGTTCCTGTTTGGAGAAGAATCAACAGAATAGCTAATAGCATAAAAACGGATCCCAGTAAAGTATATAGGAAAAACTGATA
TGCTGCCTTGATCTTTCTTTGTCTCGAACCCCATACCCCTATAATGATGGTAGAGTCAGGGGTGGCCCCAAAGCAGAATTGACCGATGGTAGTTGGTTGA
AGCTCCAGTGGGTAGCCACTCCCTTCTCAGGGAACCGTACGTGAGACTTCCGCATCATACGGCTCCATCCCGACCTTCCGTCGTCGTCCCTTGTCATTAG
ACCACTATGCTTGTCTTTTCCGCCTTGACTCTCGAATCTTTTGCTTCTTGGGTGGTGGCGAACAATGCTGCTTGCGTAGCGGGAGATGCCCGCCCGTCGT
TTAGGCCTACTTCCTGCCCGAAAGAAGGCTAGCCGGACTAGTGGTAGGGGACCCGAGCGTCAAAAACCCTACCCTATTCTCGAACCCTCTGCCGAGCTCT
ACCCTGCCCGCATTTATTTGGAAGGGGGCCAAAGAAATGTCTCCACCTGCTGCCAACAGTCTTTCTTCGGAATTCTACTGAACGGGTCGATCCTCCCCTC
CGTTTGTTTTAGCAACTTATCCTAAGGTCTCTTCGCCAAGAACTCTCCGGCAACGACAGAGGAACTAACCTGCCTGCAGTGGCGGGGCGGCTTTTTTTTT
AAATAAGACCTGGACGATTATCCCTACCCTCGGTAGCTTACGAGTTTACGTCCATCCCTGGTCGGGTACAGTTTCCTTTATTTTTATCCCTTGTAGCCGT
TACCCGAATTCGCGCAAGTGTGTCCACACCCCCCCTGACTTGACGAGGAATTCATTCTCGCGAACAAACACACCCCCTACACACACCTAGGAGCACCCCT
TCCTGCATATCCATACAAGACCTGAGTAGGCGGGTCGAGGTCCTACGAGGTACCCACTACTCGGAGTACCCTCCCACCAAAAAAAGATGTGTGGTTCGGT
GGTTCGACCAGAAATGCTATGCTTACGCACAAGACTACCCCTCTTCCCGAAAGCTTCACGGGGACCTTTACTACTTTACGACGACAGGGGACTGCCCATA
GGGGGTGACCGCCCGTAGGGGGTTTACTGCACAAGGCCCCTGCAGAGGAAAAGCTTGATCCCAGCGAATAGAAGATGCTCAGCTCCGCACAACATAGGGA
TTGGCACGCTTTCGGAAAGAACATAGAATAGTAGAGGATCCAGCATGCAGGACACGGCGATCATTAGAAATTCACGAATTAGAAATGCTGTAATATACTC
TTTCCCAAAACTTCTCATACCACACCAACCCACTGAAATGCAAATAGGGATCAGAAATGTGGTCAATATCACGAAGAATAATGAAAGACCGTCTATACCC
ATATACAAATGGATGTTTTCATAAGGAAGCCATCGAAGGCTTTCCACAAATTGAGATTTGGCCGTAGAAGGATCGAATTGTATCCGAGGAACAGGGGGAT
ACAAAAAAGTAATAAGAGAAACGCACAGACCAATCAATCGTATCGGTCTTATTGAAGAATTTGGAATGAAAAGAGGAGTAATGCTTCCTAGCATGGGACA
GAGAATAGGACCACTTAGATCGAAATAGCATTCATAGAAATGTTCTAACATAGAGTAGAATTGAACATTGAAAAGATTAGTTGACAGCAGTCAATCAAAA
GATGGGGCGCCAAATTACTAAACAATAGGGGTCTTTCTGTGCAAGTCAGCTGAACACCGTAATTGATGAGTGAGTAGGTGGGTTAGGTGCACCCCTCGCC
CAGT