Detailed information on CNT30596381


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678068Oryza meridionalisSetaria viridis38.787.1984.21114forward
CNT30291829Oryza meridionalisTriticum aestivum32.312.4184.2195forward
CNT30226086Oryza meridionalisHordeum vulgare59.523.2997.14175forward
CNT30660677Oryza meridionalisTriticum dicoccoides32.317.1284.2195forward
CNT30688804Oryza meridionalisTriticum urartu59.524.7297.71175forward
CNT30103672Oryza meridionalisOryza rufipogon37.0712.49100109forward
CNT30604201Oryza meridionalisOryza punctata32.3146.3493.6895reverse complement

Expression of CNT30596381

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MWLLGAIISHAIKKYFFFYGPSYKDRIDMDRET*

Sequence

>CNT30596381
TCTAAATTGATCATCCTCAAATCAGCTATTCCTGGGGTGGGGTATTGTCTGTCCCCATAAATAGAAAACTCTAGGAGTAATAAATTAGGAGTAAAGTATT
GATATAATTTTCGCTAGGTCCAAATTCGTCAAAGCGAAAGATCAGATCCAACGGAAATCCCGCATATTGAGCGCAGCTGATATGTGGCTACTAGGCGCGA
TCATCTCACATGCCATAAAAAAATACTTCTTTTTTTATGGCCCGTCATATAAAGATAGAATAGATATGGATAGAGAGACATAGGGTTTAGGGTT