Detailed information on CNT30486612


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002440, E-value = 2e-62

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690830Olea europaeaOryza sativa23.2315.996.6159forward
CNT30501326Olea europaeaCoffea canephora1002.492.52254reverse complement
CNT30226086Olea europaeaHordeum vulgare92.524.4290.21235reverse complement
CNT30398268Olea europaeaTriticum turgidum100.7923.9389.84256reverse complement
CNT30688804Olea europaeaTriticum urartu100.796.9189.84256reverse complement

Expression of CNT30486612

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MQGKISLILPLETGARTTTPNVTHPLPTYRL

>peptide 2 (62 aa)
MCPIQREHAAQRNVSCYTESPASHRGPSDKAMICRGKSHSFFHWKQVHERQLQTSHIHCLPTV

Sequence

>CNT30486612
GAGGAGTTGAGCCTGAACTGACGAACCGAAGTCACTTTCGAAACCATACTTCCTACAGCTAAGATGTGTCCAATCCAGCGGGAACACGCAGCGCAAAGGA
ACGTGAGTTGCTATACCGAATCCCCCGCTAGCCATCGGGGACCGAGTGATAAGGCCATGATATGCAGGGGAAAATCTCACTCATTCTTCCATTGGAAACA
GGTGCACGAACGACAACTCCAAACGTCACACATCCACTGCCTACCTACCGTTTA