Detailed information on CNT30708069


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30518558Glycine maxJuglans regia37.0720.3484.03119forward
CNT30698337Glycine maxQuercus lobata24.316.5689.7478forward
CNT30728129Glycine maxCorchorus capsularis23.0512.4687.8474forward
CNT30381626Glycine maxManihot esculenta24.6110.8586.0879forward
CNT30488674Glycine maxOlea europaea23.9913.6388.3177forward
CNT3043744Glycine maxPrunus dulcis23.9919.6485.7177forward
CNT30565212Glycine maxActinidia chinensis41.1216.0481.82132forward
CNT30717645Glycine maxMalus domestica golden23.9911.3784.4277forward
CNT30415484Glycine maxPapaver somniferum23.9913.985.7177forward
CNT3029382Glycine maxTheobroma cacao23.0512.9689.1974forward
CNT3024994Glycine maxPopulus trichocarpa25.8613.6585.5483forward
CNT30120419Glycine maxCitrus clementina25.8616.887.9583forward

Expression of CNT30708069

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MKYPSLPPFSSMFDKIQLAVELGELCHRPFHLLIGFLGEEVGEVVEQMVLRWKDLQLR*

Sequence

>CNT30708069
GCTCCTAGCATCAGATGCATTACTTGCAGAAGTAACTAATAGTGATGAAGTATCCTTCTTTGCCTCCCTTTTCATCAATGTTTGATAAAATTCAACTAGC
TGTGGAGCTCGGTGAACTTTGTCACCGTCCATTCCACCTCTTGATAGGCTTCCTGGGGGAGGAGGTGGGGGAGGTGGTGGAGCAGATGGTACTCCGTTGG
AAGGATTTGCAGTTGCGGTAACAGCAGCTCCACCAGATGGTCTAGGAGGAGGTCTAGGCACCCTAGTAGGCCTTTTCTCAATGTGAGCAAGCTTCATCTT
GCTAATGGTTTGATTATCAAC