Detailed information on CNT30488674


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30518558Olea europaeaJuglans regia26.5525.6486150forward
CNT30698337Olea europaeaQuercus lobata29.3835.2485.54166forward
CNT30728129Olea europaeaCorchorus capsularis30.0928.6282.94170forward
CNT30403117Olea europaeaBeta vulgaris21.2415.9483.33120forward
CNT30708069Olea europaeaGlycine max13.6323.9988.3177forward
CNT3043735Olea europaeaPrunus dulcis26.5540.9882150forward
CNT3093554Olea europaeaSolanum tuberosum27.4341.2285.16155forward
CNT30565212Olea europaeaActinidia chinensis24.0716.5284.56136forward
CNT3029382Olea europaeaTheobroma cacao34.6934.3383.16196forward
CNT30120419Olea europaeaCitrus clementina29.3833.688.55166forward
CNT3038944Olea europaeaCucumis melo13.9820.6388.6179forward

Expression of CNT30488674

Peptides detected in this lncRNA

>peptide 1 (74 aa)
MLKKSKMVYPSLPRVSSMSGRIQLVQELDELCHHFQPILKDFLEEVVGVEVHQQVVVMVVGHLVEEVVEVLEGP*

>peptide 2 (39 aa)
NDDLFSISPIMLLLESEVLDVEEIKDGVSFFASRFINVW*

Sequence

>CNT30488674
GGAATGATGATCTGTTCTCTATCTCCCCAATCATGTTGCTTCTAGAATCTGAGGTGCTTGATGTTGAAGAAATCAAAGATGGTGTATCCTTCTTTGCCTC
GCGTTTCATCAATGTCTGGTAGAATTCAACTAGTTCAGGAGCTCGATGAACTTTGTCACCACTTCCAGCCAATCTTGAAAGACTTCCTGGAGGAGGTGGT
GGGAGTGGAGGTCCACCAGCAGGTGGTGGTGATGGTAGTGGGGCACCTGGTGGAGGAGGTGGTGGAGGTGCTCGAGGGACCCTAGGAAGTCGCTTCTCAA
TTTGTGCAAGTTTCATTTTGCTCACTGTAGTAGAATCAATTTTGTTATCATTTGACTGGTCACCTGAGTCACCAGATGCAACTGGTTTTTCTTTTATTAG
AGTAAGTTTTGGAGGCAAAGTCACCGACTTATCTTTATCTGCCTTAGAAGGGTCACCAAACCTTGCTGCTCTTGCTTGTAGAGCTTTTTCCTTGATTTGC
TTTTCTCTTTCCAAAGCCAGCTTATGCCTATCTTTATATGCAGGATACTTCTCCTCTAGAACTCC