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Detailed information on CNT30381626


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LI74|CHUP1_ARATH, E-value = 2e-43

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30708069Manihot esculentaGlycine max10.8524.6186.0879forward
CNT30621275Manihot esculentaCajanus cajan10.5824.2989.6177forward

Expression of CNT30381626

Peptides detected in this lncRNA

>peptide 1 (60 aa)
PRVSLMSDRIQLAQELCELYHHFLPLLASFQVEEVDVVVHQEVGVGVAGHLAEEVALQLK*

Sequence

>CNT30381626
TGCCTCGCGTTTCATTAATGTCTGATAGAATTCAACTAGCTCAGGAGCTCTGTGAACTTTATCACCACTTCCTGCCCCTCTTGGCAAGCTTCCAGGTGGA
GGAGGTGGACGTGGTGGTCCACCAGGAGGTGGGGGTGGGGGTGGCGGGGCACCTGGCAGAGGAGGTGGCACTCCAGTTGAAGTAAGTTTATTTGAGTCAA
CCACAGCACCACTAGATGGTTTAGGAGGTGGCCGAGGCACCCTAGGAGGCCTCTTCTCAATGTCAGCAAGTCTCATCTTGCTTATTGATTGAGAATCAAC
AGCTTTGCCGTCATTAGATTGGCCAGCAGAAGCAATTGATTTCTCTTTTATTTGAGAAAGTTGTGATGGCAGACTTGCAGATTTCACTCTCCCCCCCTTT
GACATAGAATCAAAACTTGAATTCTCAGCAAATCTTGCTGCTCTTGCTTGCTCTGCCTTTTCTTTTATCTGCTTCTCCCTCTCTAGGGCCAATTTATGCC
GGTCTTTATAGACTGGATATTTTTCATCAAGAACTCCTTCAACTGATTTGGACATTAATTGGAAAGATGAAGCAACATTATTTAGCGAGTCACCAGAAGA
AACTTGTGTTCTAATATGGGGAACATTTGAAGGAGTTTCTGGAGAGTCGGGAATATCTTGTTCCATCTTGCCGAATGTAGTTATGGCTACACTATCACCA
GCGTTTCTCAACATTAAAGCTTCCAATG