Detailed information on CNT30698337


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LI74|CHUP1_ARATH, E-value = 2e-21

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30728129Quercus lobataCorchorus capsularis35.8828.4586.39169forward
CNT30525281Quercus lobataPhaseolus vulgaris23.7817.1585.71112forward
CNT30628846Quercus lobataVigna unguiculata42.4633.3382200forward
CNT30488674Quercus lobataOlea europaea35.2429.3885.54166forward
CNT30708069Quercus lobataGlycine max16.5624.389.7478forward
CNT3043735Quercus lobataPrunus dulcis66.6785.7983.44314forward
CNT30126429Quercus lobataCorymbia citriodora42.8939.5382.67202forward
CNT30717645Quercus lobataMalus domestica golden37.5826.1483.62177forward
CNT30621275Quercus lobataCajanus cajan36.5254.2681.98172forward
CNT3029382Quercus lobataTheobroma cacao42.8935.3888.61202forward
CNT3024994Quercus lobataPopulus trichocarpa37.5829.1186.44177forward
CNT30120419Quercus lobataCitrus clementina42.8940.8987.62202forward
CNT3038944Quercus lobataCucumis melo30.5737.684.72144forward

Expression of CNT30698337

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MFEKLMMRYPSLPLVSSMSDKIQLVQEPGELYLHFLPL*

Sequence

>CNT30698337
GCTAAGAGGAATGATGATTTATTCGCAATCTCCCCAATCATGTTACTTCTAGCATCTGATGCATTAGATGTTTGAGAAATTAATGATGAGGTATCCTTCT
TTGCCTCTCGTTTCATCAATGTCTGATAAAATTCAACTAGTTCAGGAGCCCGGTGAACTTTATCTCCACTTCCTCCCCCTCTAGGTAGGCTTCCTGGTGG
AGCAGTTGGTATTTCACCTGAAGGATTTGAATTTGTATTGGCAGAAGAACCTCCAGATCGTTTAGGAGGTGGCCGAAGCACCCTAGGAGGCCTTTTCTCA
ATGTCAGCAAGTTTCATCTTGCTTATTGTTTGAGAATCAGTCTTACCATCATTAGATTGGTCAATTGAATCACCAGAGACAGCAGCCTTTTCCTTTATTT
GAGAAAGTTTTGGTGGCAAAGTTAGAGGTTTCTCTCTTTCAACCTTGGCTGAAGATTCATATGATTTGTCA