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Detailed information on CNT30628846


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30698337Vigna unguiculataQuercus lobata32.541.482.05195forward
CNT30525281Vigna unguiculataPhaseolus vulgaris56.1751.6192.28337forward
CNT3043735Vigna unguiculataPrunus dulcis21.8335.7983.97131forward
CNT3087893Vigna unguiculataVigna radiata39.1754.0291.91235forward
CNT30171601Vigna unguiculataTrifolium pratense51.554.0281.23309forward
CNT30145936Vigna unguiculataMedicago truncatula52.548.3181.9315forward
CNT30717645Vigna unguiculataMalus domestica golden25.3322.4580.92152forward
CNT30621275Vigna unguiculataCajanus cajan51.6797.7990.97310forward
CNT3029382Vigna unguiculataTheobroma cacao32.534.1581.54195forward
CNT3024994Vigna unguiculataPopulus trichocarpa26.1725.8280.89157forward
CNT30120419Vigna unguiculataCitrus clementina27.6733.681.33166forward

Expression of CNT30628846

Peptides detected in this lncRNA

>peptide 1 (86 aa)
MHYLLKKLKVLKYLSLPPSSSMIDKIQLALELCELCHHPFPLLIGFLGEEEVEVVHLAVAVDVEHLEEEEEVVEQMVLHWQDLHLW*

>peptide 2 (41 aa)
RRKDDLFSISPIMLLLASDALLVEETKSVEVSFFASLFIND*

Sequence

>CNT30628846
CTAGGAGGAAAGATGATCTATTCTCAATTTCCCCAATCATGTTGCTCCTAGCATCAGATGCATTACTTGTTGAAGAAACTAAAAGTGTTGAAGTATCTTT
CTTTGCCTCCCTCTTCATCAATGATTGATAAAATTCAACTAGCTCTGGAGCTCTGTGAACTTTGTCACCACCCATTCCCCCTCTTGATAGGCTTCCTGGG
GGAGGAGGAGGTGGAGGTGGTCCACCTGGCGGTGGCGGTGGACGTGGAGCACCTGGAGGAGGAGGAGGAAGTGGTGGAGCAGATGGTACTCCATTGGCAG
GATTTGCATTTGTGGTAGCAGCAGCAGCACCAGATGGCTTAGGAGGAGGCCTAGGCACCCTAGTAGGCCTTTTCTCAATGTGAGCAAGCTTCATCTTGCT
GATGGTTTGATCTTCAACATTCTTTCCATCTTCAGATTTATCATTTGGTGTGCCAGAAACAACTGGTTTCTCCTTAATTTGAGTAAGCTTTGATGGCAAA
GATATAGGATTTCCTCTTTCAGCCTTAGTCATATTCAAACCTGAATTGTCACCAAACTTCTGCACTCTTGCTTTCTCTGCTTTTTCCTTAATCTGTTTTT