Detailed information on CNT3043735


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30698337Prunus dulcisQuercus lobata85.7966.6783.44314forward
CNT30628846Prunus dulcisVigna unguiculata35.7921.8383.97131forward
CNT30488674Prunus dulcisOlea europaea40.9826.5582150forward
CNT30708109Prunus dulcisGlycine max38.5228.7881.56141forward
CNT30651211Prunus dulcisRosa chinensis101.0968.2784.86370forward
CNT30717645Prunus dulcisMalus domestica golden91.2649.3491.32334forward
CNT30415484Prunus dulcisPapaver somniferum20.4913.5485.3375forward
CNT3029382Prunus dulcisTheobroma cacao5032.0583.61183forward
CNT3024994Prunus dulcisPopulus trichocarpa51.6431.0985.19189forward
CNT30120419Prunus dulcisCitrus clementina90.9867.4181.38333forward
CNT3038944Prunus dulcisCucumis melo35.7934.286.26131forward
CNT30113624Prunus dulcisFicus carica89.8942.0281.16329forward

Expression of CNT3043735

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MMKILKMMYPSLLHVSSMTDKIQPAQEHGALYQHCLPPLAGFLVEEVVLHLRVWELYQQEHLQML*

>peptide 2 (34 aa)
FSISPIMLLLASDTLDDEDIKDDVSFFASRFIND*

Sequence

>CNT3043735
GTTCTCAATCTCCCCAATCATGTTGCTCCTCGCATCAGATACATTAGATGATGAAGATATTAAAGATGATGTATCCTTCTTTGCTTCACGTTTCATCAAT
GACTGATAAAATTCAACCAGCTCAGGAGCACGGTGCACTTTATCAGCACTGCCTGCCCCCCTTGGCAGGATTCCTGGTGGAGGAGGTGGTACTCCACTTG
AGGGTTTGGGAGTTGTACCAGCAGGAGCACCTCCAGATGCTTTAGGAGGCGGCCGAGGTACCCTAGGAGGCCTCTTCTCAATTTGGGCAAGTTTCATCTT
GGTTATTGCTTGAGAATCAACAGCGTTACCATCGTTAGTTTGGTTGCTTGAATCACCCAAAATGAC