Detailed information on CNT30621275


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LI74|CHUP1_ARATH, E-value = 2e-08

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30518558Cajanus cajanJuglans regia22.412.1490.1471forward
CNT30698337Cajanus cajanQuercus lobata54.2636.5281.98172forward
CNT30381626Cajanus cajanManihot esculenta24.2910.5889.6177forward
CNT30525281Cajanus cajanPhaseolus vulgaris86.4441.9693.07274forward
CNT30628846Cajanus cajanVigna unguiculata97.7951.6790.97310forward
CNT30708109Cajanus cajanGlycine max80.1351.8496.85254forward
CNT3087893Cajanus cajanVigna radiata70.6651.4988.39224forward
CNT30171601Cajanus cajanTrifolium pratense70.0338.8184.23222forward
CNT30145936Cajanus cajanMedicago truncatula98.1147.782.96311forward
CNT3024994Cajanus cajanPopulus trichocarpa24.2912.6685.7177forward

Expression of CNT30621275

Peptides detected in this lncRNA

>peptide 1 (86 aa)
WYSIGRICICADSRTTRWFRRRPRHPSRPFLNVSKLHLANGLIISILSILRLIIWSARYNWFLLYLSKLWWQRYRTPSISLGHAQT*

>peptide 2 (33 aa)
DGTPLGGFAFVLTAAPPDGLGGGLGTLVGLFSM*

Sequence

>CNT30621275
GATGGTACTCCATTGGGAGGATTTGCATTTGTGCTGACAGCCGCACCACCAGATGGTTTAGGAGGAGGCCTAGGCACCCTAGTAGGCCTTTTCTCAATGT
GAGCAAGCTTCATCTTGCTAATGGTTTGATTATCAGCATTCTTTCCATCCTCAGATTGATCATTTGGAGTGCCAGATACAACTGGTTTCTCCTTTATTTG
AGTAAGCTTTGGTGGCAAAGATATAGGACTCCCTCTATCAGCCTTGGTCATGCTCAAACCTGAATTGTCACCAAACTTCAACACTCTTGCTTTCTCAGCC
TTTTCTTTAAGTTGTTT