Detailed information on CNT30633518


BLAST search results

BLAST vs Swiss-Prot:
sp|P27493|CB22_TOBAC, E-value = 3e-177

BLAST vs NONCODE:
NONSTUT001352, E-value = 1e-147

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30534338Capsicum annuumEucalyptus grandis71.7758.2185.37656forward
CNT30702989Capsicum annuumQuercus lobata71.7768.6981.1656forward
CNT30404043Capsicum annuumBeta vulgaris56.5646.8782.21517forward
CNT3091810Capsicum annuumSolanum tuberosum92.5689.2494.56846forward
CNT30562273Capsicum annuumActinidia chinensis68.4963.1788.34626forward
CNT3088186Capsicum annuumVigna radiata71.8860.2882.5657forward
CNT30508703Capsicum annuumSolanum lycopersicum100.2296.7392.69916forward
CNT30173250Capsicum annuumTrifolium pratense62.3649.4482.81570forward
CNT30146084Capsicum annuumMedicago truncatula71.1262.6284.92650forward
CNT30598305Capsicum annuumFraxinus excelsior46.8362.6688.79428forward
CNT30623258Capsicum annuumDaucus carota71.8866.6386.15657forward
CNT30357114Capsicum annuumLactuca sativa56.2456.2488.13514forward
CNT30705057Capsicum annuumPrunus avium61.9368.4483.57566forward
CNT30725273Capsicum annuumLupinus angustifolius77.1368.4585.53705forward

Expression of CNT30633518

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MPLDHQQDPMGQSCHRGIVGRRPHQEVHQQYGNLQRLPSRQLGKPRWPRCSVHGPNLGCPSSQVHPR*

>peptide 2 (68 aa)
MDQTWVAQVVKSTLAEYLGSSLEPHSLTKLDTITGQELGENTSKSTKHSPSAVDHLEFTVLGKGFRVC*

>peptide 3 (49 aa)
MEILPFPEISESDGESFTACPAKEGEERAIVAAAMVYKEESEGVTSLICQ

>peptide 4 (39 aa)
MRLAWRQSFSWRSFHFQRFLSQMVRASLPVRQKKGKKEP*

Sequence

>CNT30633518
AAGTAAACTCACAACTACAACTTTACAAGGGCATCAAACAATGAAATTTTAATATTGTTTTACGATATTCATTTTCCGGGGACAAAGTTTGTGGCGTAGG
CCCATGCGTTGTTGTTAACTGGATCTGCAAGGTGGTCAGCAAGGTTCTCCAATGGACCCTTTCCTGTAACAATGGCCTGAACAAAGAATCCAAACATAGA
GAACATAGCAAGTCTACCGTTCTTGATCTCCTTTACCTTGAGCTCAGCAAATGCCTCTGGATCATCAGCAAGACCCAATGGGTCAAAGCTGCCACCGGGG
TATAGTGGGTCGACGACCTCACCAAGAGGTCCACCAGCAATACGGTAACCTTCAACGGCTCCCATCAAGACAACTTGGCAAGCCCAGATGGCCAAGATGC
TCTGTGCATGGACCAAACTTGGGTTGCCCAAGTAGTCAAGTCCACCCTCGCTGAATATCTGGGATCCAGCCTTGAACCACACAGCCTCACCAAACTTGAC
ACCATTACGGGCCAAGAGCTCGGGGAAAACACATCCAAGAGCACCAAGCATAGCCCATCTGCAGTGGATCACCTCGAGTTCACGGTTCTTGGCAAAGGTT
TCAGGGTCTGCTGAAAGTCCAGCGGTATCCCACCCATAGTCACCAGGGAATTCACCAGTCAAGTAGCTTGGGGGCTCACCAGAGAATGGGCCCAAGTACT
TAACACGGTCTGGACCATACCATGGGCTGCTAGATGCGGCTGGCTTGGAGGCAGTCTTTCTCATGGAGATCCTTCCATTTCCAGAGATTTCTGAGTCAGA
TGGTGAGAGCTTCACTGCCTGTCCGGCAAAAGAAGGGGAAGAAAGAGCCATAGTAGCAGCTGCCATGGTTTATAAAGAGGAAAGTGAGGGGGTTACTAGT
TTGATATGTCAAAG