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Detailed information on CNT30598305


BLAST search results

BLAST vs Swiss-Prot:
sp|P04783|CB25_PETSP, E-value = 2e-101

BLAST vs NONCODE:
NONMTRT001605, E-value = 3e-64

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30514020Fraxinus excelsiorJuglans regia33.0925.5486.28226forward
CNT30500912Fraxinus excelsiorCoffea canephora62.5241.784.54427forward
CNT30616124Fraxinus excelsiorSesamum indicum63.437.9585.45433forward
CNT30269327Fraxinus excelsiorChenopodium quinoa46.8536.5785320forward
CNT30628736Fraxinus excelsiorVigna unguiculata57.2552.8482.86391forward
CNT30504491Fraxinus excelsiorNicotiana attenuata63.145.4687.47431forward
CNT30709059Fraxinus excelsiorGlycine max59.1574.8182.18404forward
CNT3046345Fraxinus excelsiorPrunus dulcis39.5354.9984.44270forward
CNT30633518Fraxinus excelsiorCapsicum annuum62.6646.8388.79428forward
CNT3099363Fraxinus excelsiorSolanum tuberosum63.141.2488.4431forward
CNT30562273Fraxinus excelsiorActinidia chinensis63.443.6987.07433forward
CNT30508703Fraxinus excelsiorSolanum lycopersicum62.6645.287.62428forward
CNT30173250Fraxinus excelsiorTrifolium pratense61.236.2582.3418forward
CNT30146197Fraxinus excelsiorMedicago truncatula60.4738.9383.29413forward
CNT30609649Fraxinus excelsiorGossypium raimondii62.2356.1485.65425forward
CNT30202642Fraxinus excelsiorHelianthus annuus41.5850.9985.21284forward
CNT30714756Fraxinus excelsiorMalus domestica golden63.442.6684.3433forward
CNT30623366Fraxinus excelsiorDaucus carota63.441.5985.91433forward
CNT30356707Fraxinus excelsiorLactuca sativa63.6937.485.52435forward
CNT30705057Fraxinus excelsiorPrunus avium56.3746.5581.3385forward
CNT3055180Fraxinus excelsiorAmborella trichopoda55.4936.6983.64379forward
CNT30337332Fraxinus excelsiorCynara cardunculus61.7931.9584.36422forward

Expression of CNT30598305

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MKSIYTSDAIDCSIELVKKQGLQGGQQGFPVDPFQLQLPGRRIRTWRTLQVYRS*

>peptide 2 (35 aa)
MENIASLPFLISFTLSSAKASGSSARPKGSKLPPG*

>peptide 3 (47 aa)
MDQVWISQVVKPTLTEDLRTGLEPHSLTKLDTVAGQELGKNTSKSSKH

>peptide 4 (30 aa)
SRYKYPLRSQICLLQPQYCTKQEILIPCLL*

Sequence

>CNT30598305
AGCAGGTATAAGTATCCGCTGCGGTCGCAAATATGCTTGCTGCAACCTCAATATTGCACCAAGCAGGAGATATTAATCCCATGCTTGCTGTAAAATGGAA
ACAGTGAAGCTACGGAAATTCAGTAGATAGAATAGGACCATAATCACAAACATTCGTATGATGATGCAAAAACTTCACAGGTTTTCATTAGATGAAATCA
ATATACACCTCAGACGCCATTGATTGTTCTATCGAACTCGTAAAAAAACAGGGTCTGCAAGGTGGTCAGCAAGGTTTTCCAGTGGACCCTTTCCAGTTAC
AATTGCCTGGACGAAGAATCCGAACATGGAGAACATTGCAAGTCTACCGTTCTTGATCTCCTTCACCTTGAGTTCTGCAAAAGCCTCGGGATCATCGGCA
AGACCCAAGGGGTCGAAGCTTCCACCGGGGTAAAGTGGGTCGACTACCTCACCTAGAGGTCCACCGGCAACACGGTAGCCCTCAACAGCTCCCATCAAGA
TGACTTGGCAAGCCCAGATGGCCAAAATGCTTTGGGCATGGATCAAGTTTGGATTTCCCAAGTAGTCAAGCCCACCCTCACTGAAGATTTGCGAACCGGC
CTTGAACCACACAGCCTCACCAAACTTGACACCGTTGCGGGCCAAGAGCTCGGGAAAAACACATCCAAGAGCTCCAAGCATGG