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Detailed information on CNT3091810


BLAST search results

BLAST vs Swiss-Prot:
sp|P27492|CB21_TOBAC, E-value = 2e-159

BLAST vs NONCODE:
NONSTUT001352, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30616124Solanum tuberosumSesamum indicum69.4157.6789.67658forward
CNT30633518Solanum tuberosumCapsicum annuum89.2492.5694.56846forward
CNT30508703Solanum tuberosumSolanum lycopersicum92.4192.595.32876forward

Expression of CNT3091810

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MDQAWVAQVVKSTLAEDLGSGLEPHSLTELDTITGQ*

>peptide 2 (39 aa)
LSGSTLHLYTVIKRPETRECFNIFIFRGQSLWRRTMRCC*

>peptide 3 (67 aa)
MPLDHQQDLMGQNCRQGRVGRRPHQEVHQQYGNLQRLPSRQLGKPRWPRCSVHGPSLGCPSSQVHPR*

>peptide 4 (92 aa)
CQVAHYIFTRSSNDQKLENVLIFLFSGDKVCGVGPCVVVDWVCKVISKVLQWTLSGNNGLNEESKHREHSKSAVLNLLYFELSKCLWIISKT*

Sequence

>CNT3091810
ATTGTCAGGTAGCACACTACATCTTTACACGGTCATCAAACGACCAGAAACTAGAGAATGTTTTAATATTTTTATTTTCCGGGGACAAAGTTTGTGGCGT
AGGACCATGCGTTGTTGTTGACTGGGTCTGCAAGGTGATCAGCAAGGTTCTCCAATGGACCCTTTCCGGTAACAATGGCCTGAACGAAGAATCCAAACAT
AGAGAACATAGCAAGTCTGCCGTTCTTAATCTCCTTTACTTTGAGCTCAGCAAATGCCTCTGGATCATCAGCAAGACCTAATGGGTCAAAACTGCCGCCA
GGGTAGAGTGGGTCGACGACCTCACCAAGAGGTCCACCAGCAATACGGTAACCTTCAACGGCTCCCATCAAGACAACTTGGCAAGCCCAGATGGCCAAGA
TGCTCTGTGCATGGACCAAGCTTGGGTTGCCCAAGTAGTCAAGTCCACCCTCGCTGAAGATCTGGGATCCGGCCTTGAACCACACAGCCTCACCGAACTT
GACACCATTACGGGCCAATAGCTCAGGGAAGACACATCCAAGAGCACCAAGCATAGCCCATCTGCAGTGGATCACCTCAAGTTCACGGTTCTTGGCAAAG
GTCTCAGGGTCTGCTGAAAGTCCAGCGGTATCCCATCCATAGTCACCAGGGAATTCGCCAGTCAAGTAGCTTGGGGACTCACCAGAGAATGGGCCCAAGT
ACTTAACACGGTCCGGCCATACCATGGGCTGCTAGATGGGGCAGACTTGGCGACAGCCTTTCTCATAGTGATCCTTCCATTTCCAGTGATTTCTGAGGCA
GAGGGTGAGAGTTTCACTGCCTGTCCAGCAAAAGAAGGGGAAGAAAGAGCCATTGTAGCAGCTGCCATGGTTTATAAAGAGAGGAAAGTGAGGGGGTTGC
TAGTTTGATATGTAAAAGTTAGTTGTGATGAGCTGAAGTTATTGAAAC