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Detailed information on CNT30623258


BLAST search results

BLAST vs Swiss-Prot:
sp|P92919|CB23_APIGR, E-value = 0.0

BLAST vs NONCODE:
NONMTRT001605, E-value = 1e-64

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30514316Daucus carotaJuglans regia43.5153.6983.68429forward
CNT30702989Daucus carotaQuercus lobata67.0469.2180.94661forward
CNT30628736Daucus carotaVigna unguiculata59.4379.1984.98586forward
CNT30709101Daucus carotaGlycine max50.7158.7584.4500forward
CNT3046618Daucus carotaPrunus dulcis66.4378.3583.97655forward
CNT30633518Daucus carotaCapsicum annuum66.6371.8886.15657forward
CNT3091167Daucus carotaSolanum tuberosum66.6352.3985.54657forward
CNT30173250Daucus carotaTrifolium pratense58.3249.8781.74575forward
CNT30146180Daucus carotaMedicago truncatula66.4368.2382.29655forward
CNT30621493Daucus carotaCajanus cajan66.9449.1884.39660forward
CNT30153357Daucus carotaPrunus persica67.1437.4984.44662forward
CNT30429024Daucus carotaPapaver somniferum56.845.4982.14560forward
CNT30705057Daucus carotaPrunus avium54.3664.8184.33536forward

Expression of CNT30623258

Peptides detected in this lncRNA

>peptide 1 (82 aa)
MFSRSHFPGTKFVAKAHALLFTGSAKWSARFSNGPFPVTIACTKKPNMENMASLPFLSSFTLSSANASGSSARPNGSKLPPG*

>peptide 2 (66 aa)
LTDTCITQNFIITSEIKPIYITIQIRRIECFRALTFQGRSLLQRPMHCCLQGLPSGQPGFPMAPFL*

>peptide 3 (40 aa)
MTSPSGPPATRYPSTAPIKITWVAQMARMLCAWTKLGLPK*

>peptide 4 (37 aa)
METLPLPKSSDEDGATCTALPAKEGEERAIVEAAIWE*

>peptide 5 (31 aa)
MRMELLAQPCLQKKEKKEPLLRQPFGSNRKI*

Sequence

>CNT30623258
CTGACAGACACATGTATAACACAAAATTTCATAATCACATCAGAGATCAAACCAATTTACATCACAATACAAATTAGAAGAATTGAATGTTTTCGCGCTC
TCACTTTCCAGGGACGAAGTTTGTTGCAAAGGCCCATGCATTGTTGTTTACAGGGTCTGCCAAGTGGTCAGCCAGGTTTTCCAATGGCCCCTTTCCTGTA
ACAATTGCCTGTACAAAGAAACCAAACATGGAAAACATGGCTAGTCTACCATTCTTGAGCTCCTTCACCTTAAGCTCAGCAAATGCCTCGGGATCCTCAG
CAAGGCCTAATGGGTCAAAACTTCCTCCGGGGTAAAGGGGGTCTATGACCTCGCCTAGTGGTCCACCAGCAACGCGGTATCCCTCAACAGCACCCATTAA
AATAACTTGGGTAGCCCAGATGGCCAGGATGCTCTGTGCATGGACCAAGCTTGGGTTGCCTAAGTAGTCAAGCCCGCCTTCACTGAAGATCTGTGAGCCG
GCCTTGAACCAGACAGCTTCGCCAAACTTGACACCATTTCGGGCCAAGAGCTCGGGGAAAACACAGCCAAGAGCACCAAGCATAGCCCATCTGGAGTGGA
TGACTTCAAGCTCACGGTTCTTGGCAAAGGTCTCGGGATCCGCGGAGAGTCCAGCAGTGTCCCAGCCATAGTCACCAGGGAATTCACCAGTCAGGTAAGA
TGGAGCCTCACCAGAGAATGGGCCCAAGTACTTGACTCTGTCTGGGCCGTACCATGGGCTGTCTGAGACAGTGACTTTCTTGACAGTCTTCCTCATGGAA
ACTCTTCCATTGCCAAAGAGCTCAGATGAGGATGGAGCTACTTGCACAGCCTTGCCTGCAAAAGAAGGAGAAGAAAGAGCCATTGTTGAGGCAGCCATTT
GGGAGTAACAGAAAGATATGATGATAGTTGTTGTAAGTGTTAGTAATGTAAGAAGATGAAACTTAAGGCAGTTATTTATATTAGCT