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Detailed information on CNT30146084


BLAST search results

BLAST vs Swiss-Prot:
sp|P07371|CB22_PEA, E-value = 6e-173

BLAST vs NONCODE:
NONMTRT001605, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30380511Medicago truncatulaManihot esculenta34.0150.1484.14353forward
CNT30633518Medicago truncatulaCapsicum annuum62.6271.1284.92650forward
CNT3091443Medicago truncatulaSolanum tuberosum61.4663.3685.58638forward
CNT3088186Medicago truncatulaVigna radiata64.0761.0183.46665forward
CNT30508800Medicago truncatulaSolanum lycopersicum63.270.3184.91656forward
CNT30429024Medicago truncatulaPapaver somniferum64.3554.2680.09668forward
CNT30705057Medicago truncatulaPrunus avium51.0664.0981.7530forward
CNT30119285Medicago truncatulaCitrus clementina65.5176.0682.06680forward

Expression of CNT30146084

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MSWVDGESLIAFPTNDEEERDIVEAAILVFYSLLSKQMKL

>peptide 2 (31 aa)
MGQSFHLGRVGRLPHQEVHQQYGNPPRRPLR*

Sequence

>CNT30146084
TATTACTGGTGATATGATAGTAAAGAATATTTTGGAAGAATAATTTACATTTCTTGCATGATCATCATTAACATTCATTGCATTGGCACATTGTAATATA
AAGATCTAAATGCACCGAATATTTCACTAAATTAATAACACGAAATTCGCACTCTTGTATGAGCTAGTAACTTAACATAGTTTTTATGAAGTTTTTGCTC
ACTTTCCGGGGACAAAGTTTGTGGCAAAGGCCCAAGCGTTGTTGTTGACGGGGTCAGTGATATGGTCGGCAAGGTTCTCTAGAGGTCCCTTTCCGGTTAC
AATGGCCTGAACGAAGAATCCAAACATAGAGAACATAGCTAGCCTACCATTCTTAAGTTCTTTCACCTTTAACTCTGCAAAAGCCTCTGGGTCGTCAGCG
AGGCCCAATGGGTCAAAGCTTCCACCTGGGTAGAGTGGGTCGACTACCTCACCAAGAGGTCCACCAGCAATACGGTAACCCTCCACGGCGCCCATTAAGA
TAACTTGGACTGCCCATATAGCAAGGATGCTTTGTGCATGGACTAGACTTGGGTTACCCAAGTAGTCAAGTCCACCCTCACTAAAGATTTGGGATCCTGC
CTTGAACCACACGGCCTCACCGAATTGTACACCATTGCGAGATAAGAGCTCAGGGAAGACACATCCCAAGGCACCCAACATAGCCCATCTACTGTGGATG
ACCTCGAGTTCACGGTTCTTGGCAAATGTCTCTGGGTCAGCAGAAAGTCCAGCAGTGTCCCAACCGTAGTCACCAGGGAATTCACCTGTGAGGTAGGATG
GGGCTTCACCGGAGAATGGGCCCAAGTACTTGACACGGTCTGGACCGTACCAAGGACTTCCAGAAGGAACAGACTTCTTGGTGGTTGCTTTCCTCATTGT
GACTCTTCCCACCCCAATGTCTTGGGTGGATGGGGAAAGCTTGATTGCCTTCCCTACAAATGATGAAGAAGAGAGAGACATTGTTGAAGCCGCCATTTTA
GTATTTTATTCCTTACTAAGTAAACAAATGAAGCTCAA