Detailed information on CNT30357114


BLAST search results

BLAST vs Swiss-Prot:
sp|P07369|CB2G_SOLLC, E-value = 4e-142

BLAST vs NONCODE:
NONMTRT001605, E-value = 3e-86

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30380492Lactuca sativaManihot esculenta28.9936.286.04265forward
CNT30404043Lactuca sativaBeta vulgaris50.2241.6183.22459forward
CNT30504491Lactuca sativaNicotiana attenuata56.6754.6487.84518forward
CNT30633518Lactuca sativaCapsicum annuum56.2456.2488.13514forward
CNT3091443Lactuca sativaSolanum tuberosum56.2451.0487.55514forward
CNT30714756Lactuca sativaMalus domestica golden56.7851.1384.2519forward

Expression of CNT30357114

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MASLPFLSSFTFSSANASGSSARPNGSKLPPG*

>peptide 2 (35 aa)
MYYTKLIHKRVPHHSNIISHSNSQNSLSRYKVCSI*

>peptide 3 (43 aa)
MPLGHQPDPMGRSYHQGKVGQLPHQEVHQQFCNLQLHPSRSLG*

>peptide 4 (71 aa)
MDQTWVPQVVKTTLTKDLGSSLEPYSLTKLDTITRQEFGEDAPKSSEHGPSAVDDLKLTVLNTVGAVPWTS*

>peptide 5 (78 aa)
MAHLLWMTSSSRYLTRSGPYHGLPDGATFLTAVFLMETLPFPIISEPDGAAFTACPTKEEDRAMVEAAIFVRFILKML*

Sequence

>CNT30357114
TTAAAACCTAGTATTAGAAAGGAAAACTAAATTAACACCAATTTGCCCAAAATTAAACCATGTATTATACTAAATTAATTCACAAGAGAGTTCCACATCA
CTCAAATATTATCTCGCACTCAAATTCACAAAACTCACTTTCCAGGTACAAAGTTTGTAGCATATGACCATGCATTGTTTGCAACAGGGTCAGCAAGGTG
GTCAGCGAGGTTCTCCAATGGTCCCTTTCCGGTAACAATGGCTTGAACAAAGAATCCAAACATAGAGAACATGGCTAGTCTACCGTTCTTGAGCTCCTTC
ACTTTCAGCTCAGCAAATGCCTCTGGGTCATCAGCCAGACCCAATGGGTCGAAGCTACCACCAGGGTAAAGTGGGTCAACTACCTCACCAAGAGGTCCAC
CAGCAATTCTGTAACCTTCAACTGCACCCATCAAGATCACTTGGGTAGCCCAGATGGCTAAAATGCTTTGTGCATGGATCAAACTTGGGTTCCCCAAGTA
GTCAAGACCACCCTCACTAAAGATCTGGGATCCAGCCTTGAACCATACAGCCTCACCAAACTTGACACCATTACGCGCCAAGAGTTCGGGGAAGACGCAC
CCAAGAGCTCCGAGCATGGCCCATCTGCTGTGGATGACCTCAAGCTCACGGTACTTAACACGGTCGGGGCCGTACCATGGACTTCCTGATGGTGCGACTT
TCTTGACTGCTGTCTTCCTCATGGAAACCCTTCCATTTCCGATTATTTCTGAACCAGATGGTGCTGCTTTCACTGCCTGTCCGACGAAAGAAGAAGATAG
AGCCATGGTGGAAGCTGCCATTTTTGTGAGATTTATTTTGAAGATGTTGTGATGGTTATACTTATGAAGATGGGTAGAACTGGAAGTAGATTTATAGGGT
AGTTTTTGGATCAG