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Detailed information on CNT30725273


BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 4e-137

BLAST vs NONCODE:
NONMTRT001605, E-value = 2e-84

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30373848Lupinus angustifoliusArabidopsis thaliana64.5663.5180.75665forward
CNT30504491Lupinus angustifoliusNicotiana attenuata63.6969.285.82656forward
CNT30633518Lupinus angustifoliusCapsicum annuum68.4577.1385.53705forward
CNT3099363Lupinus angustifoliusSolanum tuberosum63.6962.7886.28656forward
CNT30508703Lupinus angustifoliusSolanum lycopersicum63.1168.6486.46650forward
CNT30146197Lupinus angustifoliusMedicago truncatula64.9563.0585.05669forward
CNT30313626Lupinus angustifoliusCamelina sativa64.7657.8580.51667forward
CNT30409978Lupinus angustifoliusPapaver somniferum56.3160.880.52580forward
CNT30337332Lupinus angustifoliusCynara cardunculus58.4545.5786.71602forward

Expression of CNT30725273

Peptides detected in this lncRNA

>peptide 1 (94 aa)
MGQSCHRGRVGHDLSKRTTCNSVTLNCTHQDNLCSPYGKDTLSMDQAWVSQVVKPALTEDLGSSLEPHSLTEFNTVTSQELWEDNSQSSKHSPP*

>peptide 2 (35 aa)
MGRASPPGRPRMGKKGPWLRLPFLNDGDELVFMFM*

>peptide 3 (32 aa)
MANLPFFSSFTFNSAKASGSSARPNGSKLPPG*

>peptide 4 (59 aa)
MFYFFRCSVSGDKVGGKCPSIVVDWVCNMVGKVLQWTLTSDNSLNKETEHGEHGQPSIL*

>peptide 5 (36 aa)
MEILPTPSSGADGESFTAWPAKDGEERAMVEAAIFE*

Sequence

>CNT30725273
TGCATATAAATTAGAATTCAAATATCAAATTGAAGAGAGAACAACGGCCAACCAGATTAGAAATTAAGTTGCATTAATTTAGATCAAATAGATAAACACA
ATAATTCACATTAACTGAAGAAGTACAATTTTAATGTTTTATTTTTTTCGGTGCTCAGTTTCCGGGGACAAAGTTGGTGGCAAATGCCCAAGCATTGTTG
TTGACTGGGTCTGCAATATGGTCGGCAAGGTTCTCCAATGGACCCTTACCAGTGACAATAGCCTGAACAAAGAAACCGAACACGGAGAACATGGCCAACC
TTCCATTCTTTAGCTCCTTCACCTTCAACTCAGCAAAGGCCTCTGGGTCATCAGCAAGGCCCAATGGGTCAAAGCTGCCACCGGGGTAGAGTGGGTCATG
ACCTCTCCAAGAGGACCACCTGCAATTCTGTAACCCTCAACTGCACCCATCAAGATAACTTGTGTAGCCCATATGGCAAGGATACTCTGAGCATGGATCA
AGCTTGGGTTTCCCAAGTAGTCAAGCCCGCCCTCACTGAAGATCTGGGATCCAGCCTTGAACCACACAGCCTCACCGAATTTAACACCGTTACGAGCCAA
GAGCTCTGGGAAGACAATTCCCAAAGCTCCAAGCATAGCCCACCGTGAGTGGATCACCTCCAACTCACGGTTCTTGGCAAAGGTCTCTGGGTCAGCTGAA
AGCCCAGCAGTGTCCCAACCATAGTCACCAGGGAACTCACCAGTCAAGTAGCTTGGGGCCTCACCAGAGAATGGGCCCAAGTACTTAACACGGTCTGGGC
CGTACCATGGGCTTCCAGAGGAAACTTTCTTGGTGACAGTTTTCCTCATGGAGATCCTTCCAACTCCGAGCTCTGGAGCTGATGGGGAGAGCTTCACCGC
CTGGCCGGCCAAGGATGGGGAAGAAAGGGCCATGGTTGAGGCTGCCATTTTTGAATGATGGTGATGAGCTTGTGTTTATGTTTATGTAGGGAGTAGTGAT
TGGAAAAGATGAGAGATTTGAGGAAACATG