Detailed information on CNT30616469


BLAST search results

BLAST vs Swiss-Prot:
sp|P56331|IF1A_ONOVI, E-value = 8e-52

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671227Sesamum indicumSetaria viridis10.8131.3788.7580forward
CNT30521379Sesamum indicumSetaria italica33.6539.6582.33249forward
CNT30630340Sesamum indicumVigna unguiculata23.9238.3986.44177forward
CNT30708734Sesamum indicumGlycine max39.3251.4182.13291forward
CNT30304884Sesamum indicumTriticum aestivum13.6521.9186.14101forward
CNT30476314Sesamum indicumSaccharum spontaneum32.334.7481.17239forward
CNT30718760Sesamum indicumMalus domestica golden1530.1684.68111forward
CNT30368761Sesamum indicumSorghum bicolor36.4914.6382.59270forward
CNT30619918Sesamum indicumCajanus cajan39.7313.1886.05294forward
CNT30573246Sesamum indicumVitis vinifera39.3240.1485.57291forward
CNT3055889Sesamum indicumAmborella trichopoda31.4932.4183.26233forward
CNT30102311Sesamum indicumOryza rufipogon35.9539.7684.21266forward
CNT30576889Sesamum indicumOryza barthii35.9540.6183.83266forward
CNT30725237Sesamum indicumLupinus angustifolius16.2222.6490120forward
CNT3039930Sesamum indicumMarchantia polymorpha28.1130.179.33208forward

Expression of CNT30616469

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MYFFLQHCILLKGFCQNGGRYFGVYTLLIAQIMLK

>peptide 2 (65 aa)
YISDCISLLQDKLTVFWFLDFEFPASGFSSKMEVVLLELQIHAIFTSGSLASSGMYFKITSALSS*

>peptide 3 (66 aa)
MPMASHLPFPSIRRTCAYSWPSSLNTSSRFSSSASFFPLFRFLPPFPLFFGIAAAKPYIRRLPLFP*

>peptide 4 (72 aa)
MLLIRERPEFVSLYYFIYIYSLFLSTWPFLRFVCGPFLHVFLSAALYPPEGFLSEWWSLFWSVYSTHCTNHAE

>peptide 5 (91 aa)
MAQALNAIDAHGLTSAVPEYTQDLCVLLAVLLEHQLSLLIIGFVLSPLPILTSLSLVLRHRCSKTLYPTAPLVSLMNFLIFLLDASYPRET*

Sequence

>CNT30616469
TATATATCTGATTGTATCAGTCTTCTTCAAGACAAATTAACAGTGTTCTGGTTTCTTGATTTTGAGTTCCCTGCTTCTGGTTTTTCTTCCAAAATGGAAG
TAGTTCTTCTTGAATTGCAAATCCACGCCATTTTCACATCCGGCAGCCTTGCTTCATCAGGCATGTATTTCAAGATTACATCAGCCTTGTCATCTTGATA
ATCGCGGAGGCCGACGAGGATAATATCACCGGCAGCAATCCAGACCTTCTTGTGCATCTTGCCACGGATATGGCACAAGCGCTTAACGCCATCGATGCCC
ATGGCCTCACATCTGCCGTTCCCGAGTATACGCAGGACCTGTGCGTACTCCTGGCCGTCCTCCTTGAACACCAGCTCTCGCTTCTCATCATCGGCTTCGT
TCTTTCCCCTCTTCCGATTCTTACCTCCCTTTCCCTTGTTCTTCGGCATCGCTGCAGCAAAACCCTATATCCGACGGCTCCCCTTGTTTCCTTGATGAAT
TTCTTGATTTTTCTTCTTGATGCTTCTTATCCGAGAGAGACCTGAGTTTGTTTCTTTATATTATTTTATATATATATATAGTCTCTTTCTCTCGACATGG
CCGTTTCTTCGGTTTGTTTGTGGGCCATTTCTACATGTATTTCTTTCTGCAGCATTGTATCCTCCTGAAGGGTTTCTGTCAGAATGGTGGTCGTTATTTT
GGAGTGTATACTCTACTCATTGCACAAATCATGCTGAAGC