« Back to Lupinus angustifolius search


Detailed information on CNT30725237


BLAST search results

BLAST vs Swiss-Prot:
sp|P56331|IF1A_ONOVI, E-value = 2e-48

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671227Lupinus angustifoliusSetaria viridis19.8141.1887.62105forward
CNT30616469Lupinus angustifoliusSesamum indicum22.6416.2290120forward
CNT30630340Lupinus angustifoliusVigna unguiculata29.8134.2789.87158forward
CNT30196985Lupinus angustifoliusPisum sativum21.741.8284.35115forward
CNT30708734Lupinus angustifoliusGlycine max39.4336.9382.78209forward
CNT30304884Lupinus angustifoliusTriticum aestivum29.4333.8486.54156forward
CNT3074265Lupinus angustifoliusBrassica juncea30.3824.4388.82161forward
CNT30718760Lupinus angustifoliusMalus domestica golden33.448.183.62177forward
CNT30619918Lupinus angustifoliusCajanus cajan409.5188.21212forward
CNT30595805Lupinus angustifoliusOryza meridionalis16.9821.0386.6790forward
CNT30573246Lupinus angustifoliusVitis vinifera39.4328.8387.08209forward
CNT3055889Lupinus angustifoliusAmborella trichopoda28.6821.1484.21152forward
CNT30102311Lupinus angustifoliusOryza rufipogon29.4323.3287.18156forward
CNT30576889Lupinus angustifoliusOryza barthii29.4323.8287.18156forward

Expression of CNT30725237

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MMSPAAIQTFLCILPRMWQSRLVPSMHMASHLPLPSMRRT*

Sequence

>CNT30725237
TTGTAAACTAAGATAACCATCAATTATTGCATTCAAATTCACCATCCATATACCAGAGAAAACAAAATAAAACTCATAACAGATCCAGCACAAAGCTTGA
AACATAACAAATAATTCATCAGTATATAACAACAATAATAATAACTTGAACCGAACAAAAATTAAAAGGACAGATCTCATGGCTAGGGTTACATGAATCA
ATCACATACTTAGATTTTATCAATATCCTCATCCTCAAAATCGATATAATCAGCAGCATCACCATCCTCTTCCTCATCCAATCCACCACCAATACCTTCA
TTAAGACGCGTATTATCAGGCATGTATTTCAAGATGACGTCAGCCTTATCATCCTGATAATCACGGAGACCGACGAGGATGATGTCACCGGCGGCGATCC
AAACCTTCTTGTGCATCTTGCCACGGATGTGGCAGAGTCGTTTGGTTCCGTCGATGCACATGGCTTCGCATCTACCGTTACCGAGCATGCGGAGAACCTG
AGCGTATTCTTGACCGTCTTCTTTGAAAAC