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Detailed information on CNT30509984


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3061108Solanum lycopersicumArabidopsis lyrata20.6926.288.3360forward
CNT30597892Solanum lycopersicumFraxinus excelsior51.3848.8583.89149forward

Expression of CNT30509984

Peptides detected in this lncRNA

>peptide 1 (33 aa)
DGLIKEPIRFLLNLESTDSLSFHCTDWELFVAL*

Sequence

>CNT30509984
TGATGGTTTAATTAAGGAGCCCATCAGGTTTTTGTTGAACTTGGAAAGCACTGACTCGTTATCCTTCCACTGCACAGACTGGGAGTTATTCGTTGCTCTG
TGAAACCAGCCTCACGCAGTCCACCCCACTCTAAGAGCCAAGCAGCCCATACTTTCGTTTGGACCACGTGACTCAACTCCGTGCTTGGATAGGGCAAGCC
AGACTAATGCCAACCAAAGTCCAGCCATCTGGAACAGCCTAACATCCCACTACATTGTTGCCCCAACTTAGGTTACAAGCCCACGTTACA