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Detailed information on CNT30153271


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727389Prunus persicaCorchorus capsularis20.7928.1292.0663forward
CNT3069056Prunus persicaQuercus suber23.436.7291.5571forward
CNT30525537Prunus persicaPhaseolus vulgaris21.1220.9890.6264forward
CNT30629861Prunus persicaVigna unguiculata23.114.7788.5770forward
CNT3086859Prunus persicaVigna radiata23.123.1891.4370forward
CNT30544072Prunus persicaBrassica napus23.7623.8491.6772forward
CNT30233957Prunus persicaBrassica oleracea23.7623.8488.8972forward
CNT30171637Prunus persicaTrifolium pratense24.7524.8390.6775forward
CNT3081558Prunus persicaBrassica juncea23.768.9990.2872reverse complement
CNT30260145Prunus persicaBrassica rapa23.7623.8491.6772forward
CNT30597892Prunus persicaFraxinus excelsior21.4521.3189.2365reverse complement
CNT30623316Prunus persicaDaucus carota21.7821.7187.8866forward
CNT30620685Prunus persicaCajanus cajan20.136.3790.1661forward
CNT30175002Prunus persicaVigna angularis23.123.4191.4370forward
CNT30725324Prunus persicaLupinus angustifolius15.8423.8897.9248forward
CNT3050759Prunus persicaCucumis sativus20.4620.2691.9462forward

Expression of CNT30153271

Peptides detected in this lncRNA

>peptide 1 (46 aa)
PSLVTQAYYPSGGTKVLERCPSYSGSGHAWQCSGPPVPSKESGHVS*

>peptide 2 (31 aa)
MFWPARSKQGVGSCVLSEGSGHMVLRQEGKA*

Sequence

>CNT30153271
GCCGAGCTTAGTAACTCAAGCTTATTACCCAAGTGGGGGCACAAAAGTGTTGGAACGCTGTCCCAGCTATAGCGGGTCGGGTCATGCTTGGCAATGTTCT
GGCCCGCCCGTTCCAAGCAAGGAGTCGGGTCATGTGTCTTGAGCGAAGGCTCTGGTCACATGGTCCTTAGACAGGAGGGCAAAGCGTGAGGCTGGTTTCA
CAGAGCAGCGATAACCTCCCTCTCCTTGCAGTGGAAGGATAACGGGTCGGAGCCAACTTGAAGTCTACAATAATCTATCTTTCTTGTCAATTACTTCATC
TTT