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Detailed information on CNT30706625


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30698009Prunus aviumQuercus lobata7.0543.4188.15135reverse complement
CNT30499557Prunus aviumCoffea canephora7.2144.9584.78138reverse complement
CNT30727290Prunus aviumCorchorus capsularis6.4840.6683.87124forward
CNT3070907Prunus aviumQuercus suber7.4744.6983.22143reverse complement
CNT30382474Prunus aviumManihot esculenta9.2558.4284.75177forward
CNT30403379Prunus aviumBeta vulgaris4.1325.6589.8779forward
CNT30526114Prunus aviumPhaseolus vulgaris6.4340.4683.74123forward
CNT30506943Prunus aviumNicotiana attenuata5.0231.4886.4696forward
CNT30708521Prunus aviumGlycine max4.7529.9386.8191forward
CNT3045916Prunus aviumPrunus dulcis17.6610096.15338forward
CNT3092489Prunus aviumSolanum tuberosum3.9725.5990.7976forward
CNT3084328Prunus aviumVigna radiata5.3333.5586.27102forward
CNT30544072Prunus aviumBrassica napus4.1826.4987.580forward
CNT30509042Prunus aviumSolanum lycopersicum3.8724.1894.5974forward
CNT3061339Prunus aviumArabidopsis lyrata7.995081.7153forward
CNT30264180Prunus aviumBrassica rapa4.1826.4987.580forward
CNT30597892Prunus aviumFraxinus excelsior4.628.8586.3688reverse complement
CNT30652801Prunus aviumRosa chinensis7.8949.3588.74151forward
CNT30213232Prunus aviumHelianthus annuus6.7939.0484.62130forward
CNT30625980Prunus aviumDaucus carota4.4928.284.8886forward
CNT30479039Prunus aviumArabidopsis halleri6.1738.5683.9118forward
CNT30155101Prunus aviumPrunus persica2999.8292.79555forward
CNT30409088Prunus aviumPapaver somniferum3.9723.2490.7976reverse complement
CNT30644548Prunus aviumCannabis sativa4.3425.7892.7783forward
CNT3058191Prunus aviumAmborella trichopoda3.9724.7690.7976forward
CNT30175002Prunus aviumVigna angularis4.730.186.6790forward

Expression of CNT30706625

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MFINFLNDRVWPRREAVRASVESHFFFLFWSCERENR*

>peptide 2 (40 aa)
SFVTQAYNPSGGFEVWNFGSVLAGPVRVDYLLTLPFQARS*

>peptide 3 (97 aa)
MWLERRHWVSWLLEWRELRKAGFTEQRLPPALGSGRITSRCRSDPPWPARLSQLNQTFLQFSSSIWEVSMPKSKSETEDKSDSNTARVTASTSLNFS*

>peptide 4 (41 aa)
MILVEGRESGFVCYCLQTTHSLVDCFTIFLEDDILGTAANI*

>peptide 5 (86 aa)
MVVVNEAKMKDRSDSNTERVTASTSLNVLTTAIVSLSLLRDEKLDPLRFPIALWIAFFTIFLEVKYFLTSVVSALDSLPRLLRMID*

>peptide 6 (33 aa)
MTSLALLQTSKSLREPSNISLAHFSFCSWAKAC*

>peptide 7 (33 aa)
MMMKTWRWPQKTSIYTNVLQLLERLGVALKGSC*

Sequence

>CNT30706625
GAGCTTTGTAACGCAAGCTTATAACCCGAGTGGGGGCTTCGAGGTTTGGAACTTTGGCTCAGTATTAGCTGGTCCGGTCCGGGTCGACTATCTTCTGACT
CTCCCATTCCAAGCCAGGAGTTGAACCATGTGGCTCGAGCGAAGGCACTGGGTCTCTTGGCTCCTAGAGTGGAGGGAACTGCGTAAGGCTGGCTTCACAG
AGCAACGATTACCTCCCGCTCTTGGCAGTGGAAGGATAACGAGTCGGTGTCGCTCGGATCCACCATGGCCCGCTAGACTGTCCCAATTGAACCAAACCTT
TTTGCAATTTTCTTCCTCGATTTGGGAAGTTTCAATGCCAAAATCAAAATCAGAGACAGAGGACAAAAGTGACTCAAACACTGCAAGAGTGACTGCTTCT
ACTTCTCTCAACTTCTCATGATCCTTGTTGAGGGAAGAGAAAGCGGATTTGTTTGCTATTGCCTTCAAACTACCCATAGCCTTGTTGATTGTTTCACCAT
CTTCCTAGAGGATGACATCCTTGGCACTGCTGCAAACATCTAAGAGTCTCAGAGAGCCATCTAATATCTCATTAGCCCATTTCTCATTCTGCTCTTGGGC
TAAGGCCTGTTGAGTGAGGGGCAACTGAAGCAACCTATCAACACAATCATGCAATTCTTGGAGGCCACTTAGTTTGTGGCTTATTGATGATGATGAAGAC
GTGGAGGTGGCCTCAGAAGACCTCAATCTACACAAATGTTCTTCAACTTCTTGAACGATTGGGTGTGGCCTTGAAGGGAAGCTGTTAGAGCAAGTTGAGG
AGGGGGACATGGAATCTCATCCACTACAATCATCAGTGGGAGGTCCTTGACATGATGGTTAAGCAAGCAGCAAGCCTGATCTATAATTTTAAGGCTTTCT
AAATGGTTGTAGTGAATGAAGCAAAGATGAAGGACAGGAGTGATTCGAACACTGAGAGAGTGACTGCCTCGACATCTCTCAACGTTCTAACAACGGCAAT
AGTCTCATTGTCCTTGTTAAGGGATGAGAAACTGGATCCCTTGAGATTTCCCATAGCCTTGTGGATTGCCTTCTTCACCATCTTCCTAGAGGTCAAGTAT
TTCCTGACCTCAGTTGTGAGTGCTCTGGATTCACTTCCCCGCCTTCTTCGCATGATTGATTGAAGGTCCTGCACGCATTCCTTGGTTTGCAACAGAGCAT
CCTTGGCTCTGCTGCAACCATCCAAGATCCTCAGAGAGCCATCTAATAGCTCATTAGTTGATTTCTCATTCTGCTCTTGGGCCAAGGCTTGTTGAGTGAG
GGGCAACTGAAGCAACCTATCAACACAACTATGCAATTCTTGAAGGCCAGTTAGTTTGTGGCTGATTGATGATGATGTGGGGGTGACCTCAGAAGACCTC
AATCTACACAAATGTTCATCAACTTCTTGAACGATCGGGTGTGGCCTAGAAGGGAAGCTGTTAGAGCGAGTGTGGAAAGCCATTTCTTTTTCCTTTTTTG
GTCTTGTGAGAGAGAGAATAGATGACCTTGAAAGAATAGGTTAAATGTACAATTCAAACTGATGTGTTCCTTTCCATCTGCATCTGCTTAATATATAGTG
TTGGTTGAAGAAGGGGACATGGAATCTCATCCTCTTCAATCACCAACCAGAGGTCCTTGATATGATTGCTGGGCAAGTAGGAGGCAAGATCTGCAACCAG
TATTAATAAGTATTGGAGAAAATGGCATGAAACAGACTTGGTGATCTGGACTGTTTGTCCCCCAAACGAAACGAAAACCGGCAGAATTATTGTTACTGGG
AGTGAGATCTGAGTCTACCATTGGAGTAATAATGAACTAATTAGTCCCATTGATTTGTTAATGTTAATCTGTTTTTGATTGTTTCCCTGGATAAAATTAG
ACATGAAAGCCCCC