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Detailed information on CNT30285265


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ARZ9|R27AA_ORYSJ, E-value = 5e-78

BLAST vs NONCODE:
NONBNAT005965, E-value = 2e-43

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674447Triticum aestivumSetaria viridis24.627.7896.22185forward
CNT30628786Triticum aestivumVigna unguiculata29.9245.9292.44225forward
CNT30220581Triticum aestivumHordeum vulgare37.538.0197.16282forward
CNT30435195Triticum aestivumAegilops tauschii36.9748.0197.12278forward
CNT30241998Triticum aestivumAvena sativa41.2239.1494.84310forward
CNT30456592Triticum aestivumSaccharum spontaneum29.3926.8995.48221forward
CNT30130551Triticum aestivumLolium perenne41.0945.3796.12309forward
CNT30720017Triticum aestivumTriticum spelta43.7539.83100329forward
CNT30341903Triticum aestivumEragrostis tef40.4336.0294.74304forward
CNT30368046Triticum aestivumSorghum bicolor37.145.7495.7279forward
CNT30582668Triticum aestivumEchinochloa crusgalli35.6446.2196.27268forward
CNT30594254Triticum aestivumEragrostis curvula40.4336.6795.39304forward

Expression of CNT30285265

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MRRCWSGGMPSLSWILALTLSMVSDDSTSSVMVLPVRVFTKICIFAAVGWSPPRAAAATAVRRRGWVWAGRRGGME

>peptide 2 (31 aa)
SHPISAIDDQISRKHNIILQDFSFQRQTGHI*

Sequence

>CNT30285265
CTCGCATCCCATCTCAGCAATAGACGATCAAATATCCAGGAAACATAACATAATACTCCAAGATTTCAGTTTTCAAAGACAAACGGGACACATATAAATG
AGTTCGATTTTAGCAGAGCAAACGCAAGCCACCTCTAAGCCTTCTGGTTGTAGACGTAGGTGAGGCCGCACTTGCCGCAGTAGTGGCGGTCGAAGTGGTT
GGCCATGAAGGTGAGGCCGCACTTGCCGCAGTAGTGGCGGTCGAAGTGGTTGGCCATGAAGGTCCCGGCGCCGCACTCGGCGTTGGGGCACTCCTTCCTG
AGCCTGGTGACCTTGCCGGTGGCGTCGTCGACCTTGTAGAACTGGAGGACGGCGAGCTTCACCTTCTTGTGCTTGTGCTTTTGCTTCTTGGGCTTGGTGT
AGGTCTTCTTCTTGCGCTTCTTGGCGCCACCGCGGAGGCGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTC
CTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGACGAC
TCCACCTCCAGCGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTTCGCGGCGGTGGGGTGGTCGCCTCCGCGCGCTGCGGCGGCGACGG
CAGTGCGGCGGCGGGGTTGGGTTTGGGCTGGGCGTCGGGGTGGAATGGAGGC