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Detailed information on CNT30341903


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG87|RS272_HORVU, E-value = 2e-81

BLAST vs NONCODE:
NONSTUT000620, E-value = 1e-17

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316655Eragrostis tefCorylus avellana26.7871.7593.81226forward
CNT30178164Eragrostis tefSecale cereale27.3734.1796.54231forward
CNT30285265Eragrostis tefTriticum aestivum30.4534.1896.5257forward
CNT30435195Eragrostis tefAegilops tauschii30.3344.2196.88256forward
CNT30241998Eragrostis tefAvena sativa30.3332.3296.48256forward
CNT30655772Eragrostis tefTriticum dicoccoides28.0829.0497.89237forward
CNT30130551Eragrostis tefLolium perenne30.3337.5997.27256forward
CNT3067544Eragrostis tefLeersia perrieri27.7314.2296.15234forward
CNT30719751Eragrostis tefTriticum spelta30.3344.2996.88256forward
CNT30368046Eragrostis tefSorghum bicolor30.4542.1396.5257forward
CNT30369422Eragrostis tefOryza glumipatula27.9618.0495.76236forward
CNT30576569Eragrostis tefOryza barthii28.219.6796.22238forward
CNT30582668Eragrostis tefEchinochloa crusgalli29.3842.7697.18248forward
CNT30499448Eragrostis tefDigitaria exilis27.3730.696.97231forward
CNT30116662Eragrostis tefOryza nivara28.210.5496.22238forward
CNT30594254Eragrostis tefEragrostis curvula39.5740.2996.11334forward

Expression of CNT30341903

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MRRCWSGGMPSLSWIFAFTLSMVSEDSTSSVMVLPVRVFTKICILAGVGGRLRAAAAATAAAG*

Sequence

>CNT30341903
CTCGCATCGCATCAACTCAGTAACAGGCGTTCCAATAAGATATAGATACTGCTACTCCATTCAAGTTTCAACCTCAGACACGATCTAGATAAGATTCAAT
TCGAGTAACAAACTGCTCGGTTTTTTCAGATAGGTAAAAGCTAAGCAAAGCGAACCCTCCTTACGCCTTCTGGTTGTAGACGTAGGTGAGGCCGCACTTG
CCGCAGTAGTGGCGGTCGAAGTGGTTGGCCATGAAGGTGCCCGCGCCGCAGTCGGCGTTGGGGCACTCCTTGCGGAGGCGGGTCACCTTGCCGGTGGAGT
CGTCCACCTTGTAGAACTGGAGGACGGCGAGCTTCACCTTCTTGTGCTTGTGCTTGATCTTCTTGGGCTTGGTGTACGTCTTCTTCTTGCGCTTCTTGGC
GCCACCGCGGAGGCGGGTCACCTTGCCGGTGGAGTCGTCCACCTTGTAGAACTGGAGGACGGCGAGCTTCACCTTCTTGTGCTTGTGCTTGATCTTCTTG
GGCTTGGTGTACGTCTTCTTCTTGCGCTTCTTGGCGCCACCGCGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGG
TGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGT
GTCTGAGGACTCCACCTCCAGCGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTTGGCGGGGGTAGGGGGTCGCCTCCGCGCGGCGGCG
GCGGCGACAGCGGCGGCGGGGTAGGGTTTGGGAGGGGTGGGGGT