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Detailed information on CNT30435195


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG86|RS271_HORVU, E-value = 1e-83

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316655Aegilops tauschiiCorylus avellana39.0371.7592.92226forward
CNT30628786Aegilops tauschiiVigna unguiculata39.3846.5392.54228forward
CNT30285265Aegilops tauschiiTriticum aestivum45.635.1196.97264forward
CNT30220676Aegilops tauschiiHordeum vulgare45.4246.7198.48263forward
CNT30241998Aegilops tauschiiAvena sativa45.4233.2197.34263forward
CNT30656101Aegilops tauschiiTriticum dicoccoides45.635.4496.59264forward
CNT30456592Aegilops tauschiiSaccharum spontaneum38.6927.2594.64224forward
CNT30130551Aegilops tauschiiLolium perenne45.4238.6298.1263forward
CNT3067544Aegilops tauschiiLeersia perrieri44.7315.7496.14259forward
CNT30720204Aegilops tauschiiTriticum spelta45.4246.4799.62263forward
CNT30341903Aegilops tauschiiEragrostis tef45.0830.9296.93261forward
CNT30368046Aegilops tauschiiSorghum bicolor45.0842.7996.17261forward
CNT30369422Aegilops tauschiiOryza glumipatula40.7618.0494.92236forward
CNT30576569Aegilops tauschiiOryza barthii41.6219.9296.27241forward
CNT30582206Aegilops tauschiiEchinochloa crusgalli43.5228.4197.22252forward
CNT30499448Aegilops tauschiiDigitaria exilis39.930.696.1231forward
CNT30116662Aegilops tauschiiOryza nivara41.6210.6796.27241forward
CNT30594254Aegilops tauschiiEragrostis curvula45.0831.4898.08261forward

Expression of CNT30435195

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSSVMVLPVRVFTKICILAAVGGRLRALRRRRRRRGR

Sequence

>CNT30435195
ACTCTCGATAGGTAGGTAGGTAAAAGAGCAGAGCAAACGCAAGCCACCTCTAAGCCTTCTGGTTGTAGACGTAGGTGAGGCCGCACTTGCCGCAGTAGTG
GCGGTCGAAGTGGTTGGCCATGAAGGTGCCGGCGCCGCAGTCGGCGTTCGGGCACTCCTTCCTGAGCCTGGTGACCTTGCCGGTGGCGTCGTCGACCTTG
TAGAACTGGAGGACGGCGAGCTTCACCTTCTTGTGCTTGTGCTTTTGCTTCTTGGGCTTGGTGTAGGTCTTCTTCTTGCGCTTCTTGGCGCCGCCGCGGA
GGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTG
GTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCCAGCGTGATGGTCTTGCCCGTCAGGGTC
TTCACGAAGATCTGCATCTTGGCGGCGGTGGGAGGTCGCCTCCGCGCGCTGCGGCGGCGACGGCGGCGGCGGGGTAGGG