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Detailed information on CNT30594254


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG87|RS272_HORVU, E-value = 5e-90

BLAST vs NONCODE:
NONGMAT000502, E-value = 6e-35

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316655Eragrostis curvulaCorylus avellana27.2671.7593.81226forward
CNT30628786Eragrostis curvulaVigna unguiculata27.546.5392.98228forward
CNT30178164Eragrostis curvulaSecale cereale27.8634.1797.84231forward
CNT30285265Eragrostis curvulaTriticum aestivum3134.1897.28257forward
CNT30220676Eragrostis curvulaHordeum vulgare30.8845.4797.27256forward
CNT30435195Eragrostis curvulaAegilops tauschii30.8844.2198.05256forward
CNT30241998Eragrostis curvulaAvena sativa30.8832.3297.66256forward
CNT30656101Eragrostis curvulaTriticum dicoccoides3134.596.89257forward
CNT30456592Eragrostis curvulaSaccharum spontaneum27.0227.2595.54224forward
CNT30130551Eragrostis curvulaLolium perenne30.8837.5998.44256forward
CNT3067544Eragrostis curvulaLeersia perrieri3115.6296.11257forward
CNT30719751Eragrostis curvulaTriticum spelta30.8844.2998.44256forward
CNT30341903Eragrostis curvulaEragrostis tef40.2939.5796.11334forward
CNT30368046Eragrostis curvulaSorghum bicolor3142.1397.28257forward
CNT30369422Eragrostis curvulaOryza glumipatula28.4718.0496.61236forward
CNT30576569Eragrostis curvulaOryza barthii29.7920.4196.76247forward
CNT30582668Eragrostis curvulaEchinochloa crusgalli29.9242.7698.39248forward
CNT30499448Eragrostis curvulaDigitaria exilis27.8630.696.97231forward
CNT30116662Eragrostis curvulaOryza nivara29.7910.9396.76247forward

Expression of CNT30594254

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MRRCWSGGMPSLSWIFAFTLSMVSEDSTSSVMVLPVRVFTKICILAAVGGRLRAAAAATAAAG*

>peptide 2 (34 aa)
MKPKLNSHRINSVTGVSGRYRYCYSIQVSTSDTT*

Sequence

>CNT30594254
CAACAATCCCAGTGGCACTCAGTTATCGCAGAAAAAAGTCATTCATAAAACCGATCAATGGATGATAGCGAATTGGTAAAGATAAATCAACGATAGCATA
TATGAAACCAAAATTAAACTCGCATCGCATCAACTCAGTAACAGGCGTTTCAGGAAGATATAGGTACTGCTACTCCATTCAAGTTTCAACCTCAGACACG
ACCTAAATAAGATTCAATTCGAGTAACAAACTGCTCGGTTTCTTTTCTGATAGGTAAAAGCTAAGCAGAGCGCGAACCCTCCTTACGCCTTCTGGTTGTA
GACGTAGGTGAGGCCGCACTTGCCGCAGTAGTGGCGGTCGAAGTGGTTGGCCATGAAGGTGCCCGCGCCGCAGTCGGCGTTGGGGCACTCCTTGCGGAGG
CGGGTGACCTTGCCGGTGGAGTCGTCCACCTTGTAGAACTGGAGGACGGCGAGCTTCACCTTCTTGTGCTTGTGCTTGATCTTCTTGGGCTTGGTGTACG
TCTTCTTCTTGCGCTTCTTGGCGCCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTC
GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCC
ACCTCCAGCGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTTGGCGGCGGTGGGGGGTCGCCTCCGCGCGGCGGCGGCGGCGACAGCGG
CGGCGGGGTAGGGTTTGGGAGGGGTGGGG