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Detailed information on CNT30130551


BLAST search results

BLAST vs Swiss-Prot:
sp|P69310|UBIQ_AVESA, E-value = 2e-41

BLAST vs NONCODE:
NONSTUT000620, E-value = 4e-17

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316655Lolium perenneCorylus avellana33.1971.7592.92226forward
CNT30178164Lolium perenneSecale cereale41.2641.5796.44281forward
CNT30285265Lolium perenneTriticum aestivum45.3741.0996.12309forward
CNT30220676Lolium perenneHordeum vulgare44.9354.3596.73306forward
CNT30435195Lolium perenneAegilops tauschii41.8549.2297.54285forward
CNT30241998Lolium perenneAvena sativa46.5540.0396.21317forward
CNT30656101Lolium perenneTriticum dicoccoides45.5241.6195.81310forward
CNT30456592Lolium perenneSaccharum spontaneum32.8927.2595.09224forward
CNT3067544Lolium perenneLeersia perrieri40.6816.8495.31277forward
CNT30719751Lolium perenneTriticum spelta44.9352.9496.73306forward
CNT30341903Lolium perenneEragrostis tef44.235.6695.02301forward
CNT30368046Lolium perenneSorghum bicolor44.3549.5194.7302forward
CNT30369422Lolium perenneOryza glumipatula34.6518.0494.92236forward
CNT30576569Lolium perenneOryza barthii41.1223.1495280forward
CNT30582668Lolium perenneEchinochloa crusgalli39.2146.0397.38267forward
CNT30499448Lolium perenneDigitaria exilis33.9230.696.54231forward
CNT30116662Lolium perenneOryza nivara40.6812.2694.95277forward
CNT30594254Lolium perenneEragrostis curvula44.236.3196.01301forward

Expression of CNT30130551

Peptides detected in this lncRNA

>peptide 1 (70 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSSVMVLPVRVFTKICILAAVGGRLRALRRRRWWRRGRVWAGWW

>peptide 2 (32 aa)
MIAYETKTELTSHHLSKKRSNIQETCYSRYQF*

Sequence

>CNT30130551
CTTGTGATTGCATCACCATTAGATCAGCACAAGGTATAATAATGATTGGAGATATTATCGTCATCCACAATGATAGCATATGAAACCAAAACTGAACTCA
CATCGCATCATCTGAGTAAAAAGCGATCAAATATCCAGGAAACATGCTACTCCAGGTATCAGTTTTAACGACAAACGGAACACATATCTAAACGAGCTGT
AACCAACAGCTCAATTCAGTTCTCGATAGGTAGGGTAAAAAGAAAAGCATAGCAGACGCGGAGCCACCTCTAAGCCTTCTGGTTGTAGACGTAGGGCGAG
CTTCACCTTCTTGTGCTTGTGCTTTTGCTTCTTGGGCTTGGTGTACGTCTTCTTCTTGCGCTTCTTGGCGCCTCCGCGGAGGCGGAGCACCAGGTGGAGG
GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCT
TGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTT
GGCGGCGGTGGGGGGTCGCCTCCGCGCGCTGCGGCGGCGACGGTGGTGGCGGCGGGGAAGGGTTTGGGCTGGGTGGTGGAG