Detailed information on CNT30196554


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317648Pisum sativumCorylus avellana29.8524.1482.14140forward
CNT30517474Pisum sativumJuglans regia44.5634.8382.78209forward
CNT3069045Pisum sativumQuercus suber58.8563.4580.8276forward
CNT30628619Pisum sativumVigna unguiculata63.1132.4685.14296forward
CNT30710382Pisum sativumGlycine max43.7131.8887.8205forward
CNT30162464Pisum sativumPistacia vera82.372.1581.87386forward
CNT30636617Pisum sativumCapsicum annuum81.2429.2682.15381forward
CNT3095942Pisum sativumSolanum tuberosum75.4827.3483.9354forward
CNT30509219Pisum sativumSolanum lycopersicum52.2443.2984.08245forward
CNT30144087Pisum sativumMedicago truncatula35.6149.789.22167forward
CNT30573527Pisum sativumVitis vinifera80.3824.6979.31377forward
CNT3024809Pisum sativumPopulus trichocarpa78.4635.6280.43368forward
CNT3036865Pisum sativumCucumis melo30.4929.6785.31143forward
CNT30329128Pisum sativumDioscorea rotundata78.4614.4879.89368forward
CNT30113881Pisum sativumFicus carica30.4913.3183.92143forward

Expression of CNT30196554

Peptides detected in this lncRNA

>peptide 1 (31 aa)
FPRRYQTQRVHILVVLLSTLNMSCNWVRKIL*

Sequence

>CNT30196554
GTTTTCCTAGAAGATATCAAACCCAAAGAGTTCACATCTTGGTTGTGTTGCTCAGCACTTTGAACATGAGTTGTAACTGGGTTCGCAAGATATTGTAACT
CCGAACAATAAGAAGCCATGGCAATTTCGGATCCCTTGAATCCATAATCCAAGCTGGGATTTCTACTAGCTGAGAGATTAGAAGGCAACCCGTTGTTGTA
AAAATCATTGACGAGTTCAGAGAATTGAGCAAACAAGAGTTTACCAATTGACGCAAGAGCCAAACGTGTATTATCCATGGATACACCAATAGGCGTTCCT
TGAAAATTTCCACAATGCAAAGCCTTGTTTCTTGAAACATCAATCAAAGGATTATCATTAACAGAGTTAATCTCCCTCTCAATTGACTTAGAAGTGAATC
TAATGACTTCAATAATAGGACCAAGCCATTGTGGTGAAGTTCTAAGGGCATATCTATCTTATTTTGGCT