Detailed information on CNT30710382


BLAST search results

BLAST vs Swiss-Prot:
sp|P07218|PAL1_PHAVU, E-value = 6e-85

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30517474Glycine maxJuglans regia21.6223.1782.01139forward
CNT3069045Glycine maxQuercus suber34.0650.3483.11219forward
CNT30628619Glycine maxVigna unguiculata38.8827.4185.2250forward
CNT30196554Glycine maxPisum sativum31.8843.7187.8205forward
CNT30165848Glycine maxPistacia vera33.4433.4484.65215forward
CNT30636813Glycine maxCapsicum annuum20.687.8183.46133forward
CNT3095942Glycine maxSolanum tuberosum21.1510.587.5136forward
CNT30509219Glycine maxSolanum lycopersicum18.9721.5586.07122forward
CNT30144087Glycine maxMedicago truncatula12.2923.5187.3479forward
CNT3026176Glycine maxPopulus trichocarpa31.8827.0886.83205forward
CNT3038180Glycine maxCucumis melo28.1516.4886.19181forward
CNT30329354Glycine maxDioscorea rotundata31.122.6285200forward

Expression of CNT30710382

Peptides detected in this lncRNA

>peptide 1 (45 aa)
VLLRALHVACHRIRQILKFRTIRCHGNFSSLESIIQAGVSAGSEI*

>peptide 2 (50 aa)
MMLASNRTIEANTDVGQFKGFFGIQNLTRGSNSLGVCFVIASKISNLIPE*

>peptide 3 (31 aa)
CVAPRFARGLSPDSPNIEVQNNKMPWQFQLP*

Sequence

>CNT30710382
TTGTGTTGCTCCGCGCTTTGCACGTGGCTTGTCACCGGATTCGCCAAATATTGAAGTTCAGAACAATAAGATGCCATGGCAATTTCAGCTCCCTTGAATC
CATAATCCAAGCTGGGGTTTCTGCTGGCAGTGAGATTTGAAGCAAGAGCCAAACGTGTATTATCCATGGAGACTCCAATAGGAGTTCCTTGGAAGTTACC
ACCATGAAGTGCCTTGTTCCTTGACACATCAATCAAAGGGTTGTCATTGACTGAGTTAATCTCCCTCTCAATTGACTTGGTAGAGAATCTAATCACTTCA
ATTAGAGGACCAAGCCATTGTGGTGAAGTCCTAAGAGCATAACGGTCCTGTTTAGGCTTTTGTAAAGGATCAATCTCATGCAACTTCTTAGGTGGTGCTT
TAGTTTATGAGTCAAATGGTCAGTGAATTCAGGCTTTCCTTGCATAACTTCAGCAAAAATTGCTGAAATAACTTCAGACAAGACAGCAATGATGTTGGCT
TCAAATAGAACAATTGAGGCCAACACCGATGTTGGCCAATTCAAAGGCTTCTTTGGCATTCAGAATCTCACCAGAGGGTCCAACAGCCTTGGAGTTTGCT
TTGTGATTGCCTCCAAAATTTCAAACCTGATTCCTGAGTAGCC