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Detailed information on CNT30329128


BLAST search results

BLAST vs Swiss-Prot:
sp|A0A2H5AIW0|PAL1_NARPS, E-value = 0.0

BLAST vs NONCODE:
NONVVIT002503, E-value = 2e-28

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317648Dioscorea rotundataCorylus avellana17.5576.979.15446forward
CNT30517474Dioscorea rotundataJuglans regia8.5836.3385.32218forward
CNT30628619Dioscorea rotundataVigna unguiculata23.1364.4778.74588forward
CNT30196554Dioscorea rotundataPisum sativum14.4878.4679.89368forward
CNT30162464Dioscorea rotundataPistacia vera14.6769.7280.97373forward
CNT30636617Dioscorea rotundataCapsicum annuum18.0235.1880.35458forward
CNT3095942Dioscorea rotundataSolanum tuberosum17.5534.4480.94446forward
CNT30225885Dioscorea rotundataHordeum vulgare3.1124.1686.0879forward
CNT30568715Dioscorea rotundataActinidia chinensis5.8630.5381.88149forward
CNT30510882Dioscorea rotundataSolanum lycopersicum8.5456.5182.49217forward
CNT30144087Dioscorea rotundataMedicago truncatula10.3978.5782.95264forward
CNT30244105Dioscorea rotundataAvena sativa17.5127.0579.78445forward
CNT30460506Dioscorea rotundataSaccharum spontaneum9.1797.4978.54233forward
CNT30135526Dioscorea rotundataLolium perenne13.6940.7581.9348forward
CNT30345244Dioscorea rotundataEragrostis tef2.9930.5285.5376forward
CNT30620237Dioscorea rotundataCajanus cajan7.4421.9882.54189forward
CNT30573527Dioscorea rotundataVitis vinifera31.0451.6779.59789forward
CNT3053736Dioscorea rotundataAmborella trichopoda3.3421.7485.8885forward
CNT3024809Dioscorea rotundataPopulus trichocarpa29.5872.880.59752forward
CNT3038180Dioscorea rotundataCucumis melo13.2230.678.27336forward
CNT30113881Dioscorea rotundataFicus carica8.6920.5881.9221forward

Expression of CNT30329128

Peptides detected in this lncRNA

>peptide 1 (70 aa)
MTSERTARMLASKRTIEAKPEPTAVPLTKARPSFGCNSKKSLEIPASLKAFVASIFLPSGPTAFGVWATS*

>peptide 2 (67 aa)
MESLISRDINQWVVIHRVDLSFNGFCCRTYDFNLRTEPLRRSTKSISVLLRLLKRVKLMNLLGHLHV*

>peptide 3 (53 aa)
MFHDGCRFNLAGMVLQFVSEVISVLWFSLHNFTEHRRHDFRENSENVSFKENN*

>peptide 4 (47 aa)
MLFITQSLLAFTLGLASSESSTFTTFSSSSSSSSLIAVAAAAATAAT*

>peptide 5 (62 aa)
AAQVNATLEARAQLIWKEYNERTSSLIWTLYIYSIYAHTHTHTLTNILLNIPKLLHIKNLNK*

>peptide 6 (56 aa)
MTCTPLSCLQWQSFHCHKQSLHSPPLLAGVSSTPLQKLQSFETLKCLHPSLSLHFY*

>peptide 7 (32 aa)
MSFCISIASAVFLAEIKPKELTSWLCCSALWT*

>peptide 8 (31 aa)
MAMKILSNSSPGDFVFSPVRSSVPSSSLTKL*

>peptide 9 (37 aa)
MASKISKRMPEYPCKRVLILTSIAALVAGAEPCFVLR*

>peptide 10 (36 aa)
MRGGAKTGSDTITISSIAHAIHHPITACLHSWSGLL*

Sequence

>CNT30329128
TGCTGCTCAAGTAAATGCTACACTAGAGGCTAGAGCTCAGTTAATTTGGAAGGAATATAATGAGCGTACTTCGAGTTTGATATGGACTTTATATATATAT
AGTATATACGCGCACACGCACACGCACACGCTCACGAACATATTATTAAATATCCCAAAACTACTTCACATTAAGAACTTGAACAAATAACACAAATTAC
ATGGTATGCAATCCAGCTATTACATATTTTATTTTAAATCAAATGTGAGAAAACCAAGAGAAATAGCTAGCAATATAGAAAAATGAGAGAATAATAGATC
ATTTCTTTCAGCACAAAGGCAATGGAGCACCATTCCAATCCCTCAAACACTCCAGCAATGGGTCTATCACCTTTCCTTGTGAGATGGCAATGAAGATCTT
ATCAAACTCCTCACCCGGTGACTTTGTTTTTTCACCAGTTAGAAGTTCAGTTCCCAGCTCTTCCCTCACAAAACTGTAAAGTGGATATGACCTGCACTCC
ACTATCCTGTTTGCAATGGCAGAGTTTCCATTGTCATAAGCAATCCTTGCACTCTCCACCTCTTTTGGCAGGAGTTTCTTCAACTCCTCTTCAAAAGCTA
CAATCTTTTGAAACACTGAAGTGCTTGCATCCTTCTCTTTCTCTGCATTTTTATTGAGTGCATGCTCAACAAGAACTTGCCTTAGTTTCTGCATCAGTGG
ATATGTGTAGCTGCAAGGATCATCAATGTATGAGAAGACATACTCCCTGTCAATCACTTTGATCAAGTCTTTCTCACAAAATCTGGCAGGATGAACCTCT
CCATTTGATCCCACCGTCAGCACCCTCTTGGCAACTTGGCTAACAGTGTTCTTCACAGTGCTCCTGAGATTCTCCTCCAAATGTCTCAAGTCAATGGCTT
GACAAAGACCAACTAAGAAAGTGGATGACATGAGCTTCTGTATCTCTATTGCTTCTGCTGTTTTTCTGGCAGAAATCAAACCCAAAGAGTTGACATCTTG
GTTGTGTTGCTCTGCACTCTGGACATGATTAGTGACAGGGTTGGCCAGAGCTTGAAGCTCCGAGCAGTAAGATGCCATAGCAATTTCACCACCTTTGAGT
CCATAGTCTAAGCTTGGATTCCTTCCACCTGAGAGATTGGAAGGCAAGCCATTGTTGTAGAAATCATTAACAAGCTCTGAAAACTGAGCAAACATAAGCT
TCCCAATAGCAGCAAGAGCCAGACGAGTGTTGTCCATTGAGACACCAATTGGTGTCCCTTGGAAGTTACCACCATGGAGAGCCTTATCTCTAGAGACATC
AATCAATGGGTTGTCATTCACAGAGTTGATCTCTCTTTCAATGGATTTTGTTGCCGCACGTATGACTTCAATCTGAGGACCGAGCCATTGAGGAGAAGTA
CGAAGAGCATATCTGTCTTGCTTAGGCTTCTGAAGAGGGTCAAGCTCATGAATCTTCTTGGCCATCTTCATGTATGAACTACCATCCAATATATGTTCCA
TGATGGCTGCCGCTTCAATCTGGCCGGGATGGTGCTTCAGTTTGTGAGTGAGGTGATCAGTGTACTCTGGTTTTCCTTGCATAACTTCACAGAACACCGC
AGACATGACTTCAGAGAGAACAGCGAGAATGTTAGCTTCAAAGAGAACAATTGAAGCTAAGCCAGAACCAACAGCTGTGCCATTAACTAAAGCAAGACCC
TCCTTTGGTTGCAACTCAAAAAAGTCACTGGAGATTCCAGCAAGCTTAAAGGCCTTTGTAGCATCAATCTTCTTGCCATCAGGACCTACGGCTTTTGGAG
TTTGGGCGACCAGTTAGCAATCCAGCAATGTAGGACAGGGGAACAAGATCACCAGAAGCAGTGATAGTCCCTCTGAGAGGCAAGCACGGTGTGACATTAC
TGTTGAGCAAGCCGGTGATGGCTTCTAAAATCTCAAAGCGAATGCCAGAATATCCCTGCAAGAGAGTGTTGATTCTGACTAGCATTGCAGCTCTTGTTGC
TGGAGCTGAGCCCTGCTTTGTTCTCCGATGAGAGGTGGCGCCAAAACCGGTAGTGACACCATAACTATCAGTTCCATTGCTCATGCTATTCATCACCCAA
TCACTGCTTGCCTTCACTCTTGGTCTGGCCTCCTCTGAGAGCTCCACCTTCACTACTTTTTCATCATCATCATCATCATCATCATTAATTGCAGTTGCAG
CAGCAGCAGCTACTGCAGCTACCTGAGAGATCTTCAAGTTGGCACCTTCTAATCTGACAACAGGCTTCCTGAACTCCTCCACCATCCTCTTCACTTCATC
AAGATGGCTTCCGGCCATCGACTCCGCTGCTGCATTCCAGTTCAAAGGATCATTCTTGATCACCTTCTGGCAAATGCTTTCCATGGATGAACTGAGAGTA
AATGAAATAACACAACTGTGATGAGGTGATCAAGAGCTAGCTAGCTATAACTAGTTGAGCTGTGATGAGGTGATCATCAAGAGCATGGAGGTGTTAAATA
GAGGAGGTTAAGATCATTGGGTTGGTGGGGTTGCAATATGAA