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Detailed information on CNT30636617


BLAST search results

BLAST vs Swiss-Prot:
sp|P25872|PAL1_TOBAC, E-value = 0.0

BLAST vs NONCODE:
NONSTUT002995, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30533290Capsicum annuumEucalyptus grandis45.2449.2577.76589forward
CNT30628619Capsicum annuumVigna unguiculata37.453.481.11487forward
CNT30196554Capsicum annuumPisum sativum29.2681.2482.15381forward
CNT30162471Capsicum annuumPistacia vera59.3793.0280.85773forward
CNT3092362Capsicum annuumSolanum tuberosum90.462.0192.611177forward
CNT30189069Capsicum annuumSecale cereale14.2142.8279.46185forward
CNT30510944Capsicum annuumSolanum lycopersicum36.1895.3492.14471forward
CNT30244105Capsicum annuumAvena sativa33.5626.5778.72437forward
CNT30345244Capsicum annuumEragrostis tef4.0721.2988.6853forward
CNT30573527Capsicum annuumVitis vinifera87.7974.8579.881143forward
CNT3024809Capsicum annuumPopulus trichocarpa52.6966.4180.9686forward
CNT30329128Capsicum annuumDioscorea rotundata35.1818.0280.35458forward
CNT30592821Capsicum annuumEragrostis curvula8.225085.05107forward

Expression of CNT30636617

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MSTASAVFLDEIKPKELTSWLCCSALWTWLVTGFAKN*

>peptide 2 (44 aa)
MKFTVSAHCQSSLSYLADCVLDCILQVFFQVPQVYSLAKSHEIG*

>peptide 3 (48 aa)
IEGLPLSRVILALSTSLGNTAFNSSSKAAIFWKIELFTFFSLSPLFSA*

>peptide 4 (67 aa)
MTARMLDSNRTIDAIPEPTAVPFTSATKIADKTSDITARMLDSNRTIDAIPEPTAVPFTRASPSFGCN

>peptide 5 (51 aa)
MVSHWICQELKFRAVRSHRDFSSLETIVQAWIPSCCEIRWQTIVVIVVDKF*

>peptide 6 (51 aa)
MELLSCLDIRAAIQNVFHNSSSLNLTGMVLQLVCQMVRELGLSIHHFSENR*

>peptide 7 (46 aa)
METPIGVPWKFPPCKALFLETSINGLSFTELISLSIILVAARMTSI*

Sequence

>CNT30636617
ATTGAAGGGTTGCCACTTTCAAGAGTAATTCTTGCACTCTCAACTTCTTTAGGCAATACGGCCTTCAATTCGTCCTCGAAAGCTGCAATCTTTTGGAAGA
TTGAGCTGTTCACATTCTTCTCGCTTTCACCGTTGTTCAGTGCATGATCAACGAGGACTTGTCTCAGCTTCTGCATCAAAGGGTAGGTTGAGCTGCAGGG
ATCATCAGCATAGGCAAACAAGTATTCCCTGTCCACGACTCGAAGCAACTCCTTTTCGCAGAATCTTGCTGGATGAAGTTCACCGTTAGCGCCCATTGTC
AAAGTTCTCTTAGCTACTTGGCTGACTGTGTTCTTGACTGCATTCTTCAAGTTTTCTTCCAAGTGCCTCAAGTCTATAGCTTGGCAAAGAGCCACGAGAT
AGGTTGATGACATCAGCTTCAAGATGTCAACCGCCTCGGCTGTTTTCCTTGATGAGATTAAGCCCAAGGAGTTAACATCTTGGTTGTGTTGCTCGGCACT
TTGGACATGGTTAGTCACTGGATTTGCCAAGAATTGAAGTTCCGAGCAGTAAGAAGCCATCGCGATTTCAGCTCCCTTGAAACCATAGTCCAAGCTTGGA
TTCCTTCCTGCTGTGAGATTAGATGGCAAACCATTGTTGTAATAGTCGTTGACAAGTTCTGAGAACTGAGCAAACATCAATTTCCCAATTGATGCAAGGG
CCAATCTTGTGTTATCCATGGAGACACCAATAGGGGTGCCTTGGAAATTCCCACCGTGTAAGGCCTTGTTTCTTGAAACATCGATCAATGGATTGTCGTT
CACTGAGTTGATCTCCCTCTCGATCATCTTAGTTGCAGCGCGAATGACTTCAATTTGAGGGCCTAGCCATTGTGGAGATGTTCGGAGAGCATAACGATCT
TGCTTTGGTTTCTGGAGAGGATCCATTTCATGGAGCTTTTGAGCTGCCTTGACATAAGAGCTGCCATCCAAAATGTGTTCCATAATAGCAGCAGCCTCAA
TCTGACCGGGATGGTGCTTCAACTTGTGTGTCAGATGGTCCGTGAACTCGGGCTTTCCATTCATCACTTCAGCGAAAATCGCTGACAAAACTTCAGACAT
GACAGCAAGAATGTTGGACTCAAACAGGACCATCGACGCCATACCAGAACCAACTGCTGTACCATTCACAAGTGCAACGAAAATCGCTGACAAAACTTCA
GACATAACAGCAAGAATGTTGGACTCAAACAGGACCATCGACGCCATACCAGAACCAACTGCTGTACCATTCACAAGGGCAAGTCCTTCCTTTGGCTGCA
AC