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Detailed information on CNT3095942


BLAST search results

BLAST vs Swiss-Prot:
sp|P26600|PAL5_SOLLC, E-value = 0.0

BLAST vs NONCODE:
NONSTUT002995, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30615983Solanum tuberosumSesamum indicum11.0429.4283.22143forward
CNT30727763Solanum tuberosumCorchorus capsularis31.7451.3180.29411forward
CNT30196554Solanum tuberosumPisum sativum27.3475.4883.9354forward
CNT30710382Solanum tuberosumGlycine max10.521.1587.5136forward
CNT30162471Solanum tuberosumPistacia vera60.1593.7481.39779forward
CNT30173113Solanum tuberosumTrifolium pratense4.7927.6887.162forward
CNT30244654Solanum tuberosumAvena sativa33.0519.4379.44428forward
CNT30135526Solanum tuberosumLolium perenne22.4734.0780.07291forward
CNT30607757Solanum tuberosumGossypium raimondii6.829.9382.9588forward
CNT30329128Solanum tuberosumDioscorea rotundata34.4417.5580.94446forward

Expression of CNT3095942

Peptides detected in this lncRNA

>peptide 1 (46 aa)
METPIGVPWKLPPCKALFLETSINGLSFTELISLSIILVAARMTSI*

>peptide 2 (37 aa)
MSTASAVFLAEIKPKEFTSWLCCSALWTWLVTGFAKN*

>peptide 3 (61 aa)
MVSHWICQELKLRAVRSHRNFSSFETIVQAWIPSCCEIRWQSIVVIVVDKLRELGKHQFPN*

>peptide 4 (35 aa)
MTLASRCPQPQQFSLLRLSLRNSHLGCVAQHFGHG*

>peptide 5 (32 aa)
MKFTISTHCQSSLSYLAHCVLDSIPQVFLQMP*

Sequence

>CNT3095942
GATGTAAGTTCACAACATATTATGATAGTAATTCACCATAAGAGTAAAAAAAGAATCTGAAAAATAGCACTAGACAAGCATTAACAACTGGTCCTTTATC
TGGCAAACATTTAGCAGATTGGAAGAGGAGCACCATTCCAGCTCTTGAGACACTCCAACAATGGATCAATAATCTGTCCATTGCACATTGCTGTGAACAC
CTTGTCAATCTCCTCACCGGGCGATCGAACTTTTTCACCTGTCAACAGTTCTGATCCAAGTTCTTGTCTCACCAACCTGTACAATGGATATGATCTGCAT
TCTGTTATCCTGTTAGGAATTACAGGGTTGCCACTTTCAAGCATAGCTCTTGCACTCTCAACTTCTTTAGGCAACACAGCCTTCAATTCGTCCTCGAAAG
CTACAATCTTTTGGAAGATTGAGCTGTTCACATTCTTCTCACTTTCACCATTCTTCATTGCATGATCAACAAGGACTTGTCTCAGCTTCTGCATCAAAGG
GTAGGTTGAACTGCAGGGATCATCAGCATAGGCAAACACGTATTCCCTGTCCACGACTCGAAGCAATTCCTTCTCGCAGAATCTTGCAGGATGAAGTTCA
CCATTAGCACCCATTGTCAAAGTTCTCTTAGCTACTTGGCTCACTGTGTTCTTGACAGCATTCCTCAAGTTTTCCTCCAAATGCCTTAAGTCAATAGCTT
GGCAAAGCGCCACGAGATAGGTTGATGACATTAGCTTCAAGATGTCCACAGCCTCAGCAGTTTTCCTTGCTGAGATTAAGCCTAAGGAATTCACATCTTG
GTTGTGTTGCTCAGCACTTTGGACATGGTTAGTCACTGGATTTGCCAAGAATTGAAGCTCCGAGCAGTAAGAAGCCATCGCAATTTCAGCTCCTTTGAAA
CCATAGTCCAAGCTTGGATTCCTTCCTGCTGTGAGATTAGATGGCAATCCATTGTTGTAATAGTCGTTGACAAGCTCCGAGAATTGGGCAAACATCAATT
TCCCAATTGATGCAAGGGCCAATCTTGTATTATCCATGGAGACACCAATAGGGGTTCCTTGGAAGTTGCCACCATGTAAGGCCTTGTTTCTTGAAACATC
GATCAATGGATTGTCGTTCACTGAGTTAATCTCCCTCTCAATCATCTTAGTTGCAGCACGGATGACTTCAATTTGAGGGCCAAGCCATTGTGGAGATGTT
CGGAGAGCATAACGATCTTGCTTTGGTTTTTGAAGAGGATCCATTTCATGGAGCTTCTGAGCTTCCTTGACATAAGAGCTGCCATCCAAAATGTG