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Detailed information on CNT30144087


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30533290Medicago truncatulaEucalyptus grandis41.6711.7182.14140forward
CNT30317648Medicago truncatulaCorylus avellana85.4249.4879.79287forward
CNT30517474Medicago truncatulaJuglans regia47.3226.583.02159forward
CNT30727763Medicago truncatulaCorchorus capsularis33.3313.9884.82112forward
CNT3070920Medicago truncatulaQuercus suber33.9332.8584.21114forward
CNT30630760Medicago truncatulaVigna unguiculata48.8121.7287.8164forward
CNT30196554Medicago truncatulaPisum sativum49.735.6189.22167forward
CNT30710382Medicago truncatulaGlycine max23.5112.2987.3479forward
CNT30162471Medicago truncatulaPistacia vera88.6935.8682.55298forward
CNT30636813Medicago truncatulaCapsicum annuum88.6917.4981.54298forward
CNT3096221Medicago truncatulaSolanum tuberosum88.3920.6780.81297forward
CNT30568715Medicago truncatulaActinidia chinensis70.8348.7780.25238forward
CNT30510882Medicago truncatulaSolanum lycopersicum75.8966.4180.39255forward
CNT30243709Medicago truncatulaAvena sativa45.5418.6481.7153forward
CNT30135526Medicago truncatulaLolium perenne40.1815.8182.22135forward
CNT30203244Medicago truncatulaHelianthus annuus21.1318.4487.3271forward
CNT30620237Medicago truncatulaCajanus cajan5019.5388.1168forward
CNT30573527Medicago truncatulaVitis vinifera88.119.3881.08296forward
CNT3026176Medicago truncatulaPopulus trichocarpa88.139.181.42296forward
CNT3036865Medicago truncatulaCucumis melo47.3232.9981.76159forward
CNT30329128Medicago truncatulaDioscorea rotundata78.5710.3982.95264forward
CNT30113881Medicago truncatulaFicus carica85.7126.8282.64288forward
CNT3040161Medicago truncatulaMarchantia polymorpha34.237.9983.48115forward

Expression of CNT30144087

Peptides detected in this lncRNA

>peptide 1 (86 aa)
ELGHVLLATWLTVFLTVFLKFSSKCLKSIAWQSAIKKVEDMSFKISIASFVFLEEIKPKELTSWLCCSALCTWVVTGLARYCNSEQ*

>peptide 2 (43 aa)
GIGACSLSNLAYSVLDSVPQILFQMPQVNCLAKRDQESGRHEL*

Sequence

>CNT30144087
GGAATTGGGGCATGTTCTCTTAGCAACTTGGCTTACAGTGTTCTTGACAGTGTTCCTCAAATTCTCTTCCAAATGCCTCAAGTCAATTGCTTGGCAAAGC
GCGATCAAGAAAGTGGAAGACATGAGCTTTAAGATCTCAATAGCCTCGTTTGTTTTTCTAGAAGAAATCAAACCCAAAGAGTTAACGTCTTGGTTGTGTT
GCTCAGCACTTTGCACATGGGTGGTGACAGGGTTAGCAAGATATTGTAACTCGGAGCAATAAGAAGCCATAGCAATTTCAGATCCCTTGAAACCATAATC
CAAACTTGGGTTTCTACTTGCAGTAAGATTCGAAGG