Detailed information on CNT3017024


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30616633Zea maysSesamum indicum29.3514.5389.8359forward
CNT3020326Zea maysCitrullus lanatus22.3912.3693.3345forward
CNT3042661Zea maysPrunus dulcis63.6843.3981.25128forward
CNT3098506Zea maysSolanum tuberosum44.284.2883.1589forward
CNT30567368Zea maysActinidia chinensis59.220.886.55119forward
CNT30586158Zea maysMusa acuminata81.5939.5282.93164forward
CNT30228578Zea maysAnanas comosus25.878.898.0852forward
CNT30718002Zea maysMalus domestica golden65.1743.5283.21131forward
CNT30366246Zea maysSorghum bicolor71.6431.2495.83144forward
CNT30704355Zea maysPrunus avium75.6212.7380.92152forward
CNT3025942Zea maysPopulus trichocarpa27.3616.6287.2755forward
CNT30119217Zea maysCitrus clementina74.1316.5481.88149forward
CNT3063316Zea maysSelaginella moellendorffii66.6758.7781.34134forward

Expression of CNT3017024

Peptides detected in this lncRNA

>peptide 1 (65 aa)
GSLLDVADGVVMGAAAVVVVAAGGALERAAAPGEAVLAVLIDAAAGGAVGARVVVVADGGRRGGGR

Sequence

>CNT3017024
AGGTTCCCTGCTTGACGTTGCAGACGGGGTAGTCATGGGGGCAGCAGCTGTAGTGGTCGTCGCAGCAGGTGGCGCCCTCGAGCGGGCAGCAGCCCCAGGC
GAAGCAGTACTTGCCGTACTCATAGATGCAGCAGCAGGTGGTGCTGTCGGGGCACGAGTAGTAGTTGTCGCAGACGGTGGGCGGCGGGGTGGGGGAAGGC
G