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Detailed information on CNT3098506


BLAST search results

BLAST vs Swiss-Prot:
sp|P20721|CYSPL_SOLLC, E-value = 1e-136

BLAST vs NONCODE:
NONSTUT001208, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548101Solanum tuberosumIpomoea triloba4.2328.5785.2388forward
CNT3042661Solanum tuberosumPrunus dulcis4.0928.8184.7185forward
CNT30511648Solanum tuberosumSolanum lycopersicum23.2471.5691.72483forward
CNT3017024Solanum tuberosumZea mays4.2844.2883.1589forward
CNT30718002Solanum tuberosumMalus domestica golden2.9820.690.3262forward
CNT30596150Solanum tuberosumOryza meridionalis3.934.3285.1981forward
CNT30370131Solanum tuberosumOryza glumipatula3.938.5785.1981forward

Expression of CNT3098506

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MELKDTAASGADRALRRFITLGRWLDWRWRRWSGFRRICACLYWI*

>peptide 2 (48 aa)
MAATAENAQQLPGSFRTKIFSHTPNLLNRTIQMFCHFFMVGAHNLVVV*

>peptide 3 (29 aa)
LQNLIFLFKFEIGTFNIDVRKHGGTKQKR*

>peptide 4 (79 aa)
MYQFTSLCWRCSFTSFHCIGACRIQELLFFPPFPKAPIGCARMRFIAFTPNGLPLLCINKSNRVSREKTLVQILYVVCA*

>peptide 5 (55 aa)
MHLSVSTPFCWKMRFVNQCTNSRPSVGAALSPHSTVLVLVEFKNCSSFLHFRRPQ*

Sequence

>CNT3098506
CTGCAAAACCTAATTTTTTTATTTAAATTTGAAATTGGAACCTTCAACATTGATGTACGTAAACATGGTGGGACAAAACAAAAGAGGTAACTGAAAGGTA
CAGAAGATAGTCTTTTTTATTATTATTGTTGAAACCAAGTACCAATGGAAGAATAAAAAGCATTACTTGGAGTCTTCATAATAAGAAACAAGGACTATGT
ACTGAATAATTAGACAAAGTAGAACAATAATCCTTCTTCAATAAAGAAGCAATATATACAAATCATTAATCAACATCTTGTAATCTTGATAATGCATTTG
TCTGTCTCTACACCTTTCTGCTGGAAAATGAGGTTTGTTAATCAATGTACCAATTCACGTCCCTCTGTTGGCGCTGCTCTTTCACCTCATTCCACTGTAT
TGGTGCTTGTAGAATTCAAGAACTGCTCTTCTTTCCTCCATTTCCGAAGGCCCCAATAGGTTGTGCAAGAATGCGCTTCATTGCCTTCACTCCCAATGGG
TTGCCCTTGCTCTGTATCAACAAAAGCAATAGAGTAAGTAGAGAAAAAACTCTGGTCCAAATTCTTTACGTTGTCTGTGCATAGGAGAGTTGAAACTCCT
TTGTAGAATTGACAAATTCAAATTACTTACCATTGAGCAGGTGCCTTGACGAACATTGCAGACAGGATAGTCGTGTGGGCAGCAACTGTAGTGGTCTTCA
CAGCAAGTGGCTCCTTCAAGTGGGCAGCATCCCCAAGAGAAGCAAGAATTATGGAACTGAAGGATACAGCAGCAAGTGGTGCCGACAGGGCATTGAGAAG
ATTCATCACACTCGGTAGGTGGCTTGACTGGAGATGGAGGAGATGGAGCGGGTTTAGGAGGATTTGCGCCTGTCTTTACTGGATATGAAGGCTCTATGGC
TAAACCACACAAGCCACTAGACCTGGCAACGTTACGTTGGACTCTGAGGTAGCCCTTCTCTCCCCATTTAGCTCCCCATGAGTTCCTAACAATCCAATAA
TCCATGCCATTCTCAGTACCATATCCAGCAGCAACTACACCATGATCCACTGCAGTACCACATTTTCCAGTAAAGATACCCTGAAATTACAAGTAGGATA
ATCGCGTGAATAATTGGATCTGATCATTGTTATATCATAGTAATCGACCTACAATTATAAGTATGTCAACTAATATATCTTTGGTCGAAAAAAACTACAC
GTCATTGATCAAAAGGCAACATTTTACTGGAAAGACATTAACTTAGATTAGGGTAATACGAGAATAGAAACATACAGATTTGTAGTGCTGGAAGTCTCTG
CCACCAGCTTCAATTGCAATGCTCACAGGTTGATGTGCAACAGCCTTTTGTAGCGCCTTTTCGTTATTAACAGGAACATCTTCATAGCTATCTATTTTAA
CAACCTTGGCATTTTTCTGCATCACAAACAAAATATGTTGCCACTTATTAGTCTAAATTTAACATTGGTATTTAGTTAAGAGTGTAATTGAAATCAAGAA
TGTTATACTGACCCTATATTGGTCGCATACGTCATTACGTTCTTTGTAAGGGTAGTCTTCTTCAGTGTCAATTCCTCCATTATTGATGACGAATTCAAAG
GCATAGTCCATAAGACCACCATCGCAACCTTGATTGTACGACTTATCACAATCCACCAACTCTTGCTCTGATAGTGATATCAAATTCCCGGTTACTATCG
CATTTATTGATTCCATGGCAGCAACGGCAGAGAATGCCCAACAACTCCCTGGTTCATTTAGAACAAAAATATTCAGCCATACGCCAAATTTATTGAATAG
AACTATACAAATGTTTTGCCATTTTTTTATGGTTGGGGCACATAATTTAGTGGTAGTTTAGCAGTAAAATTGTTATATCACAATTCACATGGGTCATTTG
GTAGCTGGTTAGAATTCATAACTCGCAAATACATTGCTCATTCGCCCGATACATAATTATAAACCAGGTTCATACTGATTTAGATTTAAAATAATTGAGA
TTATGTATTAACAATAACATTTGTACCAGATACATCATATACAAATAAAGTTGTAATGTATCTGATAGAGGAAGAGTG