Detailed information on CNT30586158


BLAST search results

BLAST vs Swiss-Prot:
sp|P25776|ORYA_ORYSJ, E-value = 3e-56

BLAST vs NONCODE:
NONVVIT001489, E-value = 1e-25

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30711290Musa acuminataGlycine max21.456.7685.3989forward
CNT3042661Musa acuminataPrunus dulcis23.1332.5482.2996forward
CNT30567368Musa acuminataActinidia chinensis60.4843.8878.49251forward
CNT30143968Musa acuminataMedicago truncatula17.8321.9687.8474forward
CNT30462305Musa acuminataSaccharum spontaneum38.3138.7884.28159forward
CNT3017024Musa acuminataZea mays39.5281.5982.93164forward
CNT30718002Musa acuminataMalus domestica golden55.4276.4179.57230forward
CNT30366246Musa acuminataSorghum bicolor34.731.2483.33144forward
CNT30412746Musa acuminataPapaver somniferum39.5224.380.49164forward
CNT30704355Musa acuminataPrunus avium42.4114.7480.11176forward
CNT30319475Musa acuminataAsparagus officinalis63.6110.2979.55264forward
CNT30119217Musa acuminataCitrus clementina32.2914.8784.33134forward

Expression of CNT30586158

Peptides detected in this lncRNA

>peptide 1 (29 aa)
LGRFLPEHCRWGSHEDNSCNDLRSRQVPS*

>peptide 2 (74 aa)
MRTTAVMIFAAGRFLPEHCRWGSHEDSSCNDLHSRLQPQEDSIPMQSSSSRTHRRSSMWYSLGRCSSYHRRWVA*

>peptide 3 (71 aa)
MRTAAVMIFTAGCSLKRTASPCKAVAPVLIDAAACGTLWAGVVVITDGGWLNGGRWRWTRVWWVLALLNGV*

>peptide 4 (31 aa)
MGYEASIAIPHLPVADAILRSIRMYPASPQSS

>peptide 5 (29 aa)
MRPPLQYHTCQWQMQYYVPFVCIQPRPSLH

Sequence

>CNT30586158
CATTAGGCAGGTTCCTTCCTGAACATTGCAGATGGGGTAGTCATGAGGACAACAGCTGTAATGATCTTCGCAGCAGGCAGGTTCCTTCCTGAACATTGCA
GATGGGGTAGTCATGAGGACAGCAGCTGTAATGATCTTCACAGCAGGTTGCAGCCTCAAGAGGACAGCATCCCCATGCAAAGCAGTAGCTCCCGTACTCA
TAGACGCAGCAGCATGTGGTACTCTCTGGGCAGGTGTAGTAGTTATCACAGACGGTGGGTGGCTTAACGGGGGAAGGTGGAGATGGACCAGGGTTTGGTG
GGTTCTGGCCCTTCTTAATGGGGTATGAGGCCTCCATTGCAATACCACACTTGCCAGTGGCAGATGCAATATTACGTTCCATTCGTATGTATCCAGCCTC
GCCCCAGTCTTCACC