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Detailed information on CNT3020326


BLAST search results

BLAST vs Swiss-Prot:
sp|P25776|ORYA_ORYSJ, E-value = 1e-51

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3042661Citrullus lanatusPrunus dulcis18.1322.3786.3666forward
CNT3017024Citrullus lanatusZea mays12.3622.3993.3345forward

Expression of CNT3020326

Peptides detected in this lncRNA

>peptide 1 (68 aa)
GRYRWGSHGGSSCNGHHNSIPIQGTSLRTRRYSSMFQRRDRCNIHRIQMGVSPDLEEWGLDLVGSVRF*

Sequence

>CNT3020326
GGACGTTACAGATGGGGTAGTCATGGGGGCAGCAGCTGTAATGGTCATCACAACAGCATCCCCATTCAAGGCACAAGTTTGAGAACTCGAAGATACAGCA
GCATGTTTCAGCGGCGGGACAGGTGTAATATTCATCGCATACAGATGGGGGTTTCACCGGACTTGGAGGAGTGGGGCCTGGATTTGGTGGGTTCGGTCCG
TTTTTAATTGGGTAGGAAGGCTCCATTGCAATCCCACAAAGACCATTTGGGGAAGCGATATTACGTTGCATCCTGACGTAGCCACTTTCACCCCAGCTCG
CACCCCATGAGTTTCTCACAATCCAGTAATCAACGCCCCCTTCAGACCCATATCCAACCACATT