« Back to Selaginella moellendorffii search


Detailed information on CNT3063316


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30462305Selaginella moellendorffiiSaccharum spontaneum55.730.9882.68127forward
CNT3017024Selaginella moellendorffiiZea mays58.7766.6781.34134forward
CNT30366246Selaginella moellendorffiiSorghum bicolor35.0917.3586.2580forward

Expression of CNT3063316

Peptides detected in this lncRNA

>peptide 1 (74 aa)
RKITTNERSATTDREVGRAAVVVIVAASGRLERAASPREAVLAIIEQAAASATLGASVVVVALVGWRHWRWWSRA

>peptide 2 (45 aa)
AEDHNERTISHNGSGSRTGSSGSDRRSKWPTGEGSIPTRSSTCHN*

Sequence

>CNT3063316
GCGGAAGATCACAACGAACGAACGATCAGCCACAACGGATCGGGAAGTCGGACGGGCAGCAGTGGTAGTGATCGTCGCAGCAAGTGGCCGACTGGAGAGG
GCAGCATCCCCACGCGAAGCAGTACTTGCCATAATTGAACAGGCAGCAGCAAGTGCTACTCTCGGGGCAAGTGTAGTAGTCGTCGCACTCGTTGGGTGGC
GGCACTGGCGATGGTGGAGTCGGGCCTG