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Detailed information on CNT30127630


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692294Corymbia citriodoraOryza sativa17.920.059580forward
CNT30677986Corymbia citriodoraSetaria viridis14.9921.4194.0367forward
CNT30532230Corymbia citriodoraEucalyptus grandis76.5167.0691.52342forward
CNT30191267Corymbia citriodoraSecale cereale17.4522.9494.8778forward
CNT30224947Corymbia citriodoraHordeum vulgare17.6726.8793.6779forward
CNT30395161Corymbia citriodoraTriticum turgidum17.6722.1993.6779forward
CNT30309894Corymbia citriodoraCamelina sativa17.4537.3292.3178forward
CNT30135839Corymbia citriodoraLolium perenne17.6733.3393.6779forward
CNT30219096Corymbia citriodoraKalanchoe fedtschenkoi17.6722.5193.6779forward
CNT3067939Corymbia citriodoraLeersia perrieri14.7722.9295.4566reverse complement
CNT30652446Corymbia citriodoraRosa chinensis1724.693.4276forward
CNT30721855Corymbia citriodoraTriticum spelta17.6720.7993.6779forward

Expression of CNT30127630

Peptides detected in this lncRNA

>peptide 1 (33 aa)
APSKLVVCVSEIRSPRIKKRREQRDRESEAPTG*

>peptide 2 (45 aa)
RHRSWSFAFRRFVRRGLRREESRETEKAKLPQDEGQVEEEAYEEA*

Sequence

>CNT30127630
GCGCCATCGAAGTTGGTCGTTTGCGTTTCGGAGATTCGTTCGCCGCGGATTAAGAAGAGAAGAGAGCAGAGAGACAGAGAAAGCGAAGCTCCCACAGGAT
GAGGGCCAAGTGGAAGAAGAAGCGTATGAGGAGGCTTAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCAAAGTAGTTTCATGTCGTGTGAAGCACCGTT
GGCCTCGATTAGCTTTCATCTTGTCTACCTGATAAAACATACTATAATGGGATGTCAGAGTGGATGAGGGGCTTTTTGATCATTTCATATTATTAGGTTA
GTTGTTGGATATCAGACTTCCTTTGAGTTTTACACAAGTAGGCATTTTGTTTGACTTAATGAAATGCTTTGATATGCTTAGACATCTTGCTTGGAGATTA
TTTAAGTACCTATGAAGCAGTGATTTTGCGTTAATGATTTAGGTTAA