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Detailed information on CNT30532230


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30590300Eucalyptus grandisMusa acuminata1025.596.0851forward
CNT30127630Eucalyptus grandisCorymbia citriodora62.3571.1490.88318forward

Expression of CNT30532230

Peptides detected in this lncRNA

>peptide 1 (33 aa)
IRTETPPSQYRLRCGDLTSRTKKRREERQRKRS*

Sequence

>CNT30532230
ATATAAGAACTGAAACTCCGCCATCCCAGTATCGTTTGCGTTGCGGAGATTTGACGTCGCGGACGAAGAAGAGAAGAGAAGAGAGACAGAGAAAGCGAAG
CTGAGATCAGAATGAGGGCCAAGTGGAAGAAGAAGCGTATGAGGAGGCTTAAGAGGAAGCGCCGAAAGATGAGGCAGAGGTCAAAGTAGTTTCATGTTGT
GTGGAGTTCCGTTGGCCTTGATTAGCCTTCATCTTGTCTACCTGATAAAACATACTATAAAGGGCTGTCAGAGTGGATGAGGGGCTTTTTGATCATTTGG
TATTAGCTTAGTTGTTGCATATCAGACTTTATTTGAGTTCTACACAATAGGCATGTTGTTTGACTTAATGAAATGCTTTGATGTGCTTAGACATGTTGCT
CGGAGATTGTTTAAGTACCGATGAAGCAGGGATTTTGCGCTCATGATTTTGTTTAACTTCCTTTTGTATGGATTTTCGCAAAGTCCATATATCATGTTTT
AATATGATAC