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Detailed information on CNT3067939


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695362Leersia perrieriOryza sativa22.2223.4410064forward
CNT30675831Leersia perrieriSetaria viridis22.5711.9710065reverse complement
CNT30523531Leersia perrieriSetaria italica22.579.4810065reverse complement
CNT30533222Leersia perrieriEucalyptus grandis22.572096.9265reverse complement
CNT30318276Leersia perrieriCorylus avellana22.926.498.4866reverse complement
CNT30518318Leersia perrieriJuglans regia22.9210.4698.4866reverse complement
CNT30701352Leersia perrieriQuercus lobata22.9216.6796.9766reverse complement
CNT30500546Leersia perrieriCoffea canephora23.2614.4795.5267reverse complement
CNT3072716Leersia perrieriQuercus suber22.9213.596.9766reverse complement
CNT30525538Leersia perrieriPhaseolus vulgaris23.2614.6395.5267reverse complement
CNT30628539Leersia perrieriVigna unguiculata23.2611.0297.0167reverse complement
CNT30194705Leersia perrieriPisum sativum23.2612.1497.0167reverse complement
CNT30506885Leersia perrieriNicotiana attenuata22.5711.9996.9265reverse complement
CNT30709704Leersia perrieriGlycine max23.2610.7595.5267reverse complement
CNT3043430Leersia perrieriPrunus dulcis22.2210.7298.4464reverse complement
CNT30163346Leersia perrieriPistacia vera23.2610.1297.0167reverse complement
CNT30635666Leersia perrieriCapsicum annuum22.926.8495.4566reverse complement
CNT30191267Leersia perrieriSecale cereale23.612098.5368reverse complement
CNT30307634Leersia perrieriTriticum aestivum23.6110.6497.0668reverse complement
CNT30227210Leersia perrieriHordeum vulgare22.5714.4196.9265reverse complement
CNT30399552Leersia perrieriTriticum turgidum23.6110.6997.0668reverse complement
CNT30564366Leersia perrieriActinidia chinensis22.9211.3895.4566reverse complement
CNT30590300Leersia perrieriMusa acuminata23.613492.6568reverse complement
CNT3085016Leersia perrieriVigna radiata23.269.5697.0167reverse complement
CNT30233654Leersia perrieriBrassica oleracea22.9213.7293.9466reverse complement
CNT30172851Leersia perrieriTrifolium pratense23.2611.1597.0167reverse complement
CNT30144286Leersia perrieriMedicago truncatula23.2618.8797.0167forward
CNT30442977Leersia perrieriAegilops tauschii23.6114.597.0668reverse complement
CNT30248711Leersia perrieriAvena sativa23.6112.0497.0668reverse complement
CNT30599582Leersia perrieriFraxinus excelsior22.9214.6395.4566reverse complement
CNT30468162Leersia perrieriSaccharum spontaneum22.578.8898.4665reverse complement
CNT30132841Leersia perrieriLolium perenne23.2612.8894.0367reverse complement
CNT3011623Leersia perrieriZea mays23.6116.8395.5968forward
CNT30216203Leersia perrieriKalanchoe fedtschenkoi22.9215.3896.9766reverse complement
CNT30652446Leersia perrieriRosa chinensis22.2220.7195.3164reverse complement
CNT30207458Leersia perrieriHelianthus annuus22.5711.6995.3865reverse complement
CNT30127630Leersia perrieriCorymbia citriodora22.9214.7795.4566reverse complement
CNT30716113Leersia perrieriMalus domestica golden22.9211.4898.4866reverse complement
CNT30625768Leersia perrieriDaucus carota22.9211.593.9466reverse complement
CNT30722856Leersia perrieriTriticum spelta23.6116.0897.0668reverse complement
CNT30348934Leersia perrieriEragrostis tef23.613.8498.5368forward
CNT30363122Leersia perrieriSorghum bicolor23.6117.3994.1268forward
CNT30596688Leersia perrieriOryza meridionalis35.0718.7492.08101reverse complement
CNT30359324Leersia perrieriLactuca sativa22.9211.0793.9466reverse complement
CNT30154619Leersia perrieriPrunus persica22.2215.7698.4464reverse complement
CNT30574365Leersia perrieriVitis vinifera22.9211.1998.4866reverse complement
CNT3032717Leersia perrieriTheobroma cacao23.267.6798.5167reverse complement
CNT3057178Leersia perrieriAmborella trichopoda22.9211.4496.9766forward
CNT3025185Leersia perrieriPopulus trichocarpa23.6111.3794.1268reverse complement
CNT30324349Leersia perrieriAsparagus officinalis23.2614.0297.0167reverse complement
CNT30118123Leersia perrieriCitrus clementina23.2611.997.0167reverse complement
CNT30584684Leersia perrieriEchinochloa crusgalli22.5713.610065reverse complement
CNT30499031Leersia perrieriDigitaria exilis23.9612.994.269reverse complement
CNT30593864Leersia perrieriEragrostis curvula23.9612.3794.269reverse complement
CNT30604511Leersia perrieriOryza punctata2513.8298.6172reverse complement
CNT30175235Leersia perrieriVigna angularis23.2610.697.0167reverse complement
CNT30556718Leersia perrieriPanicum hallii22.9214.7393.9466reverse complement
CNT30112128Leersia perrieriFicus carica21.5311.3396.7762reverse complement
CNT30725207Leersia perrieriLupinus angustifolius22.9218.3395.4566reverse complement

Expression of CNT3067939

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MNGDATPSLTAEDTVQHDTPSPSWPSSPT*

>peptide 2 (32 aa)
MTRHHHHGLHRLLRSLPHLSALPLQPPHALLLP

Sequence

>CNT3067939
AGAAGTGCCAAAAGAACAGAACAATTAACGGATAGCAAACCATCAATTAAACCAACACAGTAAGTACTCAACGGTTGGTAAATATTAGCAGCAAATAAGG
TAACATGACAGGTTTCTGAAATAAGCCATTCAACAGACGAATGAATGGTGATGCCACGCCAAGCTTGACAGCGGAAGATACGGTTCAACATGACACGCCA
TCACCATCATGGCCTTCATCGCCTACTTAGATCTCTGCCTCATCTTTCGGCGCTTCCTCTTCAGCCTCCTCATGCGCTTCTTCTTCCA