Detailed information on CNT30135839


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372647Lolium perenneArabidopsis thaliana32.9126.991.0378forward
CNT30188323Lolium perenneSecale cereale40.0812.4896.8495forward
CNT30543929Lolium perenneBrassica napus32.9117.2691.0378forward
CNT30310640Lolium perenneCamelina sativa36.2920.6791.8686forward
CNT3059857Lolium perenneArabidopsis lyrata27.8520.2592.4266forward
CNT3075281Lolium perenneBrassica juncea32.9117.8592.3178forward
CNT30261673Lolium perenneBrassica rapa32.917.1292.3178forward
CNT3013205Lolium perenneZea mays35.869.3891.7685forward
CNT30127630Lolium perenneCorymbia citriodora33.3317.6793.6779forward
CNT30477004Lolium perenneArabidopsis halleri32.9117.5792.3178forward
CNT30499031Lolium perenneDigitaria exilis36.7116.2696.5587forward
CNT30725701Lolium perenneLupinus angustifolius32.914.7392.3178forward

Expression of CNT30135839

Peptides detected in this lncRNA

>peptide 1 (33 aa)
SAAAASRDVDLERVLRHHLRDEGQVEEEENEEA*

Sequence

>CNT30135839
TCCGCCGCCGCAGCAAGCCGAGACGTAGACCTAGAACGCGTGCTGCGCCACCACCTCCGCGATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGCTT
AAGAGGAAGCGACGAAAGATGAGGCAGCGATCGAAGTAGGCGCACAACAAGGGAGATTGCCTCTTTCTATTGGGATCTTCTCATTCATGATGTGCTTTGT
TGGTGACTTTTGATTCCTGATATGTAGGTTATGAATG