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Detailed information on CNT30219096


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692294Kalanchoe fedtschenkoiOryza sativa23.9321.0594.0584forward
CNT30675831Kalanchoe fedtschenkoiSetaria viridis21.9414.1894.8177forward
CNT30523531Kalanchoe fedtschenkoiSetaria italica21.9411.2294.8177forward
CNT30318276Kalanchoe fedtschenkoiCorylus avellana22.517.6697.4779forward
CNT30547713Kalanchoe fedtschenkoiIpomoea triloba22.519.2194.9479forward
CNT30701352Kalanchoe fedtschenkoiQuercus lobata22.5119.9594.9479forward
CNT30278460Kalanchoe fedtschenkoiChenopodium quinoa22.5112.793.6779forward
CNT3070099Kalanchoe fedtschenkoiQuercus suber22.5114.1894.9479forward
CNT30404042Kalanchoe fedtschenkoiBeta vulgaris22.5116.4694.9479forward
CNT30526086Kalanchoe fedtschenkoiPhaseolus vulgaris22.2214.6192.3178forward
CNT30628518Kalanchoe fedtschenkoiVigna unguiculata22.227.7593.5978forward
CNT30494259Kalanchoe fedtschenkoiOlea europaea22.2215.4897.4478forward
CNT30506885Kalanchoe fedtschenkoiNicotiana attenuata21.9414.2194.8177forward
CNT30163346Kalanchoe fedtschenkoiPistacia vera22.5111.9394.9479forward
CNT30638745Kalanchoe fedtschenkoiCapsicum annuum22.5115.5293.6779forward
CNT3094527Kalanchoe fedtschenkoiSolanum tuberosum22.5115.1393.6779forward
CNT30187809Kalanchoe fedtschenkoiSecale cereale23.9313.3194.0584forward
CNT30307634Kalanchoe fedtschenkoiTriticum aestivum22.2212.2194.8778forward
CNT30223926Kalanchoe fedtschenkoiHordeum vulgare23.9313.6494.0584forward
CNT30395161Kalanchoe fedtschenkoiTriticum turgidum23.9323.694.0584forward
CNT30564366Kalanchoe fedtschenkoiActinidia chinensis22.5113.6292.4179forward
CNT3085016Kalanchoe fedtschenkoiVigna radiata22.5111.2792.4179forward
CNT30544307Kalanchoe fedtschenkoiBrassica napus22.7916.192.580forward
CNT30172276Kalanchoe fedtschenkoiTrifolium pratense22.7916.5393.7580forward
CNT30145007Kalanchoe fedtschenkoiMedicago truncatula20.5112.1294.4472forward
CNT30243105Kalanchoe fedtschenkoiAvena sativa23.9314.4695.2484forward
CNT3060340Kalanchoe fedtschenkoiArabidopsis lyrata22.2215.8592.3178forward
CNT30601041Kalanchoe fedtschenkoiFraxinus excelsior22.2213.9896.1578forward
CNT30449388Kalanchoe fedtschenkoiSaccharum spontaneum23.9316.3495.2484forward
CNT30132841Kalanchoe fedtschenkoiLolium perenne23.6515.9695.1883forward
CNT3013205Kalanchoe fedtschenkoiZea mays23.939.2794.0584forward
CNT30608736Kalanchoe fedtschenkoiGossypium raimondii22.7914.049580forward
CNT30652772Kalanchoe fedtschenkoiRosa chinensis22.2213.1192.3178forward
CNT30213082Kalanchoe fedtschenkoiHelianthus annuus21.9417.1592.2177forward
CNT30127630Kalanchoe fedtschenkoiCorymbia citriodora22.5117.6793.6779forward
CNT30716113Kalanchoe fedtschenkoiMalus domestica golden22.2213.5796.1578forward
CNT30625768Kalanchoe fedtschenkoiDaucus carota22.7913.9493.7580forward
CNT30722009Kalanchoe fedtschenkoiTriticum spelta23.9320.0594.0584forward
CNT30348900Kalanchoe fedtschenkoiEragrostis tef23.9318.194.0584forward
CNT30479698Kalanchoe fedtschenkoiArabidopsis halleri23.3617.991.4682forward
CNT30596688Kalanchoe fedtschenkoiOryza meridionalis22.2214.4794.8778forward
CNT30355299Kalanchoe fedtschenkoiLactuca sativa21.9411.0892.2177forward
CNT30423745Kalanchoe fedtschenkoiPapaver somniferum23.3617.0892.6882forward
CNT30704989Kalanchoe fedtschenkoiPrunus avium22.2210.2594.8778forward
CNT3032717Kalanchoe fedtschenkoiTheobroma cacao22.519.0496.279forward
CNT3057178Kalanchoe fedtschenkoiAmborella trichopoda22.5113.6993.6779reverse complement
CNT3024261Kalanchoe fedtschenkoiPopulus trichocarpa22.229.5294.8778forward
CNT30326905Kalanchoe fedtschenkoiAsparagus officinalis22.2217.7793.5978forward
CNT30120214Kalanchoe fedtschenkoiCitrus clementina22.2215.293.5978forward
CNT30581427Kalanchoe fedtschenkoiEchinochloa crusgalli24.2220.4394.1285forward
CNT30499031Kalanchoe fedtschenkoiDigitaria exilis23.9315.794.0584forward
CNT30593653Kalanchoe fedtschenkoiEragrostis curvula24.2218.694.1285forward
CNT30604511Kalanchoe fedtschenkoiOryza punctata22.2214.9794.8778forward
CNT30556718Kalanchoe fedtschenkoiPanicum hallii24.2218.9795.2985forward
CNT30551345Kalanchoe fedtschenkoiOryza brachyantha23.3614.6491.4682forward
CNT30112128Kalanchoe fedtschenkoiFicus carica20.2312.9894.3771forward
CNT30115234Kalanchoe fedtschenkoiEutrema salsugineum22.7919.6192.580forward

Expression of CNT30219096

Peptides detected in this lncRNA

>peptide 1 (84 aa)
TRAFRNPNCWYRQPFVCHIRRTVGKHLSRDESQVEEEADEEAEEEAPEDEAEIQVESAAGLSVVGISHLGVANLIFGFCTRWRL*

>peptide 2 (33 aa)
METLMLKLRFQYILADFASPDFYFSVNHINDPS*

Sequence

>CNT30219096
ACGCGAGCATTTCGAAACCCTAATTGTTGGTACCGGCAGCCGTTCGTCTGCCATATCCGAAGAACTGTAGGCAAACATTTGAGCCGCGATGAGAGCCAAG
TGGAAGAAGAAGCGGATGAGGAGGCTGAAGAGGAAGCGCCGGAAGATGAGGCAGAGATCCAAGTAGAGAGTGCTGCTGGGTTGTCTGTTGTCGGAATTTC
ACATCTGGGTGTCGCTAATTTAATCTTCGGTTTTTGTACTAGATGGAGACTTTAATGTTGAAGTTGCGCTTTCAATATATTTTGGCTGACTTTGCTTCAC
CGGATTTTTACTTCTCAGTTAATCATATTAATGATCCGTCCTGATCTGCAA